RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 RBPMS2Q6ZRY4 209 aaKnown RBP13.74□□□□□ -0.21
RGP1-202ENST00000496906 IQCF2Q8IXL9 164 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 TMEM167BQ9NRX6 74 aa13.74□□□□□ -0.21
RGP1-202ENST00000496906 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 TEX46H3BTG2 121 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 H3BTX0 84 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 WIPF1O43516 503 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 MEOX2P50222 304 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
RGP1-202ENST00000496906 CCL20P78556 96 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 PDE6HQ13956 83 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 GUK1Q16774 197 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 GBGT1Q8N5D6 347 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 DCANP1Q8TF63 244 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 BLNKQ8WV28 456 aa13.72□□□□□ -0.21
RGP1-202ENST00000496906 SLC17A3O00476 420 aa13.71□□□□□ -0.21
RGP1-202ENST00000496906 SOCS3O14543 225 aa13.71□□□□□ -0.21
RGP1-202ENST00000496906 PSMB3P49720 205 aa13.71□□□□□ -0.21
RGP1-202ENST00000496906 LCN12Q6JVE5 192 aa13.71□□□□□ -0.21
RGP1-202ENST00000496906 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
RGP1-202ENST00000496906 ZNF253O75346 499 aa13.71□□□□□ -0.22
RGP1-202ENST00000496906 NDUFB4O95168 129 aa13.71□□□□□ -0.22
RGP1-202ENST00000496906 RAB14P61106 215 aa13.71□□□□□ -0.22
RGP1-202ENST00000496906 PAFAH1B2P68402 229 aa13.71□□□□□ -0.22
RGP1-202ENST00000496906 GPR61Q9BZJ8 451 aa13.71□□□□□ -0.22
RGP1-202ENST00000496906 TRAV2A0A0B4J234 112 aa13.7□□□□□ -0.22
RGP1-202ENST00000496906 DNASE2O00115 360 aaPredicted RBP13.7□□□□□ -0.22
RGP1-202ENST00000496906 TFPI2P48307 235 aa13.7□□□□□ -0.22
RGP1-202ENST00000496906 CLLU1Q5K131 121 aa13.7□□□□□ -0.22
RGP1-202ENST00000496906 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
RGP1-202ENST00000496906 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
RGP1-202ENST00000496906 K7EQG2 157 aa13.69□□□□□ -0.22
RGP1-202ENST00000496906 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
RGP1-202ENST00000496906 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
RGP1-202ENST00000496906 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
RGP1-202ENST00000496906 TRAV8-2A0A0B4J237 113 aa13.68□□□□□ -0.22
RGP1-202ENST00000496906 GUCA2BQ16661 112 aa13.68□□□□□ -0.22
RGP1-202ENST00000496906 OXLD1Q5BKU9 147 aa13.68□□□□□ -0.22
RGP1-202ENST00000496906 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
RGP1-202ENST00000496906 OR4C46A6NHA9 309 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 ISLRO14498 428 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 PPT1P50897 306 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 RANP62826 216 aaKnown RBP13.67□□□□□ -0.22
RGP1-202ENST00000496906 PSG9Q00887 426 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 FAM24BQ8N5W8 94 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
RGP1-202ENST00000496906 ARL2-SNX15V9GYD0 113 aa13.67□□□□□ -0.22
RGP1-202ENST00000496906 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 FAM74A7A6NL05 159 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 UBE2G2P60604 165 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 Q9H3A6 140 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 MANBALQ9NQG1 85 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 PKD1L1Q8TDX9 2849 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 PAGE4O60829 102 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
RGP1-202ENST00000496906 GGTLC3B5MD39 225 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 ID1P41134 155 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 BEAN1Q3B7T3 259 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 RNF182Q8N6D2 247 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 AAMDCQ9H7C9 122 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 OTORQ9NRC9 128 aa13.65□□□□□ -0.22
RGP1-202ENST00000496906 IFNA1P01562 189 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 ZNF688P0C7X2 276 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 SNRPD3P62318 126 aaKnown RBP13.64□□□□□ -0.23
RGP1-202ENST00000496906 ICAM4Q14773 271 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 CLEC5AQ9NY25 188 aa13.64□□□□□ -0.23
RGP1-202ENST00000496906 G3V4G9 280 aa13.63□□□□□ -0.23
RGP1-202ENST00000496906 BCL2P10415 239 aa13.63□□□□□ -0.23
RGP1-202ENST00000496906 HAGHQ16775 308 aa13.63□□□□□ -0.23
RGP1-202ENST00000496906 PGPA6NDG6 321 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 M0R3E3 92 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 ATP5G3P48201 142 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
RGP1-202ENST00000496906 EGFEM1PQ0D2K5 195 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 PSG3Q16557 428 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 CST9LP1Q5W188 147 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 FAM210AQ96ND0 272 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
RGP1-202ENST00000496906 LOC102723971A0A1B0GUV8 181 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 ODF3L2Q3SX64 289 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 CCDC28AQ8IWP9 274 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 MRPL53Q96EL3 112 aaKnown RBP13.62□□□□□ -0.23
RGP1-202ENST00000496906 MAP6D1Q9H9H5 199 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 PRELID1Q9Y255 219 aa13.62□□□□□ -0.23
RGP1-202ENST00000496906 SORL1Q92673 2214 aa13.61□□□□□ -0.23
RGP1-202ENST00000496906 RBFOX3A6NFN3 312 aa13.61□□□□□ -0.23
RGP1-202ENST00000496906 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
RGP1-202ENST00000496906 CD7P09564 240 aa13.61□□□□□ -0.23
RGP1-202ENST00000496906 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms