RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 Q8IYB0 196 aa2.55□□□□□ -2
SNX13-211ENST00000496855 TMEM106AQ96A25 262 aa2.55□□□□□ -2
SNX13-211ENST00000496855 DUSP21Q9H596 190 aa2.55□□□□□ -2
SNX13-211ENST00000496855 FRMPD1Q5SYB0 1578 aa2.55□□□□□ -2
SNX13-211ENST00000496855 STRCP1A6NGW2 1772 aa2.55□□□□□ -2
SNX13-211ENST00000496855 ARHGEF12Q9NZN5 1544 aa2.54□□□□□ -2
SNX13-211ENST00000496855 PRDM2Q13029 1718 aa2.54□□□□□ -2
SNX13-211ENST00000496855 TRGV10A0A0A0MS01 117 aa2.54□□□□□ -2
SNX13-211ENST00000496855 TRBV10-2A0A0K0K1G8 114 aa2.54□□□□□ -2
SNX13-211ENST00000496855 FAM236AA0A1B0GUQ0 79 aa2.54□□□□□ -2
SNX13-211ENST00000496855 FAM236BA0A1B0GV22 79 aa2.54□□□□□ -2
SNX13-211ENST00000496855 TP53I11O14683 189 aa2.54□□□□□ -2
SNX13-211ENST00000496855 MAXP61244 160 aa2.54□□□□□ -2
SNX13-211ENST00000496855 SELENOWP63302 87 aa2.54□□□□□ -2
SNX13-211ENST00000496855 RELAQ04206 551 aa2.54□□□□□ -2
SNX13-211ENST00000496855 EIF5AL1Q6IS14 154 aaKnown RBP2.54□□□□□ -2
SNX13-211ENST00000496855 HAGHLQ6PII5 290 aaPredicted RBP2.54□□□□□ -2
SNX13-211ENST00000496855 LCN15Q6UWW0 184 aa2.54□□□□□ -2
SNX13-211ENST00000496855 Q6ZQT0 140 aa2.54□□□□□ -2
SNX13-211ENST00000496855 C7orf65Q6ZTY9 151 aa2.54□□□□□ -2
SNX13-211ENST00000496855 HMGN2P46Q86SG4 172 aa2.54□□□□□ -2
SNX13-211ENST00000496855 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
SNX13-211ENST00000496855 DIRC1Q969H9 104 aa2.54□□□□□ -2
SNX13-211ENST00000496855 ARL11Q969Q4 196 aa2.54□□□□□ -2
SNX13-211ENST00000496855 MRPS24Q96EL2 167 aaKnown RBP2.54□□□□□ -2
SNX13-211ENST00000496855 AP1S3Q96PC3 154 aa2.54□□□□□ -2
SNX13-211ENST00000496855 PKMYT1Q99640 499 aa2.54□□□□□ -2
SNX13-211ENST00000496855 TCOF1Q13428 1488 aaKnown RBP2.54□□□□□ -2
SNX13-211ENST00000496855 NUP98P52948 1817 aa2.54□□□□□ -2
SNX13-211ENST00000496855 DNMBPQ6XZF7 1577 aa2.53□□□□□ -2
SNX13-211ENST00000496855 POLA1P09884 1462 aaPredicted RBP2.53□□□□□ -2
SNX13-211ENST00000496855 RTL9Q8NET4 1388 aa2.53□□□□□ -2
SNX13-211ENST00000496855 IGLV2-18A0A075B6J9 118 aa2.53□□□□□ -2
SNX13-211ENST00000496855 IGHV1-18A0A0C4DH31 117 aa2.53□□□□□ -2
SNX13-211ENST00000496855 A0A0J9YX75 114 aa2.53□□□□□ -2
SNX13-211ENST00000496855 LOC100130705A0A1B0GUX0 176 aa2.53□□□□□ -2
SNX13-211ENST00000496855 C9orf170A2RU37 121 aa2.53□□□□□ -2
SNX13-211ENST00000496855 RER1O15258 196 aa2.53□□□□□ -2
SNX13-211ENST00000496855 TPST1O60507 370 aa2.53□□□□□ -2
SNX13-211ENST00000496855 TCL1BO95988 128 aa2.53□□□□□ -2
SNX13-211ENST00000496855 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
SNX13-211ENST00000496855 CTSDP07339 412 aaPredicted RBP2.53□□□□□ -2
SNX13-211ENST00000496855 CRYGSP22914 178 aa2.53□□□□□ -2
SNX13-211ENST00000496855 NDUFA6P56556 154 aa2.53□□□□□ -2
SNX13-211ENST00000496855 EMX2Q04743 252 aa2.53□□□□□ -2
SNX13-211ENST00000496855 OR4S1Q8NGB4 309 aa2.53□□□□□ -2
SNX13-211ENST00000496855 TIMM9Q9Y5J7 89 aa2.53□□□□□ -2
SNX13-211ENST00000496855 CDK5RAP2Q96SN8 1893 aa2.53□□□□□ -2
SNX13-211ENST00000496855 MED14O60244 1454 aa2.53□□□□□ -2.01
SNX13-211ENST00000496855 SLX4Q8IY92 1834 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 SPEF2Q9C093 1822 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 TRAV40A0A0B4J280 105 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 A0A1W2PNM2 257 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 NPFFO15130 113 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 IFNGP01579 166 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 AKR1D1P51857 326 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 NNATQ16517 81 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 Q6ZS52 159 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 CTAGE3PQ8IX95 158 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 MORN4Q8NDC4 146 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 OR5A2Q8NGI9 324 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 OR5H6Q8NGV6 325 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 BCL2L10Q9HD36 194 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 HHLA3Q9XRX5 114 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 TRPM1Q7Z4N2 1603 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 DCAF1Q9Y4B6 1507 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 SETXQ7Z333 2677 aaKnown RBP2.52□□□□□ -2.01
SNX13-211ENST00000496855 DISP2A7MBM2 1401 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 ZNF142P52746 1687 aaPredicted RBP2.52□□□□□ -2.01
SNX13-211ENST00000496855 SHPRHQ149N8 1683 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 ABCA8O94911 1581 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 FOCADQ5VW36 1801 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 ZNF518AQ6AHZ1 1483 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 POLR1AO95602 1720 aaPredicted RBP2.52□□□□□ -2.01
SNX13-211ENST00000496855 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 K7ERU9 68 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 GPX1P07203 203 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 FUSP35637 526 aaKnown RBP eCLIP2.52□□□□□ -2.01
SNX13-211ENST00000496855 FXYD2P54710 66 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 QRFPP83859 136 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 WHAMMP3Q1A5X7 153 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 GLIPR1L1Q6UWM5 242 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 DEFB128Q7Z7B8 93 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 PRELID3AQ96N28 172 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 ZNF714Q96N38 554 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 SDF2Q99470 211 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 BANF2Q9H503 90 aa2.52□□□□□ -2.01
SNX13-211ENST00000496855 MYOM1P52179 1685 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 ADAMTS7Q9UKP4 1686 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 SEC16AO15027 2179 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 ABCC8Q09428 1581 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 NRKQ7Z2Y5 1582 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 VCANP13611 3396 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 RALGAPBQ86X10 1494 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 RAPGEF2Q9Y4G8 1499 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 BIVM-ERCC5R4GMW8 1640 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 WIZO95785 1651 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 IGKV1D-42A0A075B6H8 117 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
SNX13-211ENST00000496855 A0A0D9SG52 128 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms