RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ARL16Q0P5N6 197 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 CD300EQ496F6 205 aaPredicted RBP6.6□□□□□ -1.35
U2AF1-212ENST00000496462 MORN3Q6PF18 240 aaPredicted RBP6.6□□□□□ -1.35
U2AF1-212ENST00000496462 WFDC9Q8NEX5 89 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
U2AF1-212ENST00000496462 NIPSNAP3BQ9BS92 247 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 OTORQ9NRC9 128 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 OR10J4P0C629 311 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 FHL3Q13643 280 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 TMEM14CQ9P0S9 112 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 PGPA6NDG6 321 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 CSN3P07498 182 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 MRGPRG-AS1Q2M3A8 158 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 ALKAL2Q6UX46 152 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 C5orf17Q8NAS9 161 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 HRH4Q9H3N8 390 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 TREM1Q9NP99 234 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 GNG13Q9P2W3 67 aa6.59□□□□□ -1.35
U2AF1-212ENST00000496462 LOC102724200A0A096LPH7 203 aaPredicted RBP6.59□□□□□ -1.36
U2AF1-212ENST00000496462 TMEM213A2RRL7 107 aa6.59□□□□□ -1.36
U2AF1-212ENST00000496462 RNF222A6NCQ9 220 aa6.59□□□□□ -1.36
U2AF1-212ENST00000496462 UBE2CO00762 179 aa6.59□□□□□ -1.36
U2AF1-212ENST00000496462 GCHFRP30047 84 aa6.59□□□□□ -1.36
U2AF1-212ENST00000496462 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.36
U2AF1-212ENST00000496462 LSM4Q9Y4Z0 139 aaKnown RBP6.59□□□□□ -1.36
U2AF1-212ENST00000496462 TNCP24821 2201 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
U2AF1-212ENST00000496462 PSG3Q16557 428 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 C18orf65Q6ZTR6 163 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 TET2Q6N021 2002 aaPredicted RBP6.58□□□□□ -1.36
U2AF1-212ENST00000496462 BUB3O43684 328 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 ZNF253O75346 499 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 UBE2G2P60604 165 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 ICAM4Q14773 271 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 MIR17HGQ75NE6 70 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 TMEM61Q8N0U2 210 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 MS4A6AQ9H2W1 248 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 VSIRQ9H7M9 311 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 MED9Q9NWA0 146 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 HIST1H2BAQ96A08 127 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 LINC00477Q96M19 166 aa6.58□□□□□ -1.36
U2AF1-212ENST00000496462 PMS2P5A8MQ11 134 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 IGLV1-51P01701 117 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 SULT1A2P50226 295 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 NKX2-5P52952 324 aaPredicted RBP6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PRR20EP86478 221 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PRR20CP86479 221 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PRR20DP86480 221 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PRR20BP86481 221 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PRR20AP86496 221 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 UNQ9165/PRO28630Q6UXU0 137 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 FOXI2Q6ZQN5 318 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 MRPL53Q96EL3 112 aaKnown RBP6.57□□□□□ -1.36
U2AF1-212ENST00000496462 SRD5A3Q9H8P0 318 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 RFNGQ9Y644 331 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 ARL14EPLP0DKL9 152 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 SUMO1P63165 101 aaKnown RBP6.57□□□□□ -1.36
U2AF1-212ENST00000496462 HIST2H2BDQ6DRA6 164 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 PDE6DO43924 150 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 GPX1P07203 203 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 ACTL10Q5JWF8 245 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
U2AF1-212ENST00000496462 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
U2AF1-212ENST00000496462 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 RPL35AP18077 110 aaKnown RBP6.56□□□□□ -1.36
U2AF1-212ENST00000496462 OXLD1Q5BKU9 147 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 Q5BKY6 102 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 Q9H3A6 140 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 INSP01308 110 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 STAG3L2P0CL84 134 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 STAG3L3P0CL85 134 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 KIAA0141Q14154 515 aaPredicted RBP6.56□□□□□ -1.36
U2AF1-212ENST00000496462 C9orf62Q8N4C0 152 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 TMEM170AQ8WVE7 144 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
U2AF1-212ENST00000496462 RRN3P1Q2M238 152 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.55□□□□□ -1.36
U2AF1-212ENST00000496462 PRR25Q96S07 402 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 ARL2-SNX15V9GYD0 113 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 RGS13O14921 159 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 GLMPQ8WWB7 406 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 WFDC1Q9HC57 220 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
U2AF1-212ENST00000496462 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 IGKV3-20P01619 116 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 C15orf54Q8N8G6 183 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 CYB561D1Q8N8Q1 229 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 C11orf1Q9H5F2 150 aa6.55□□□□□ -1.36
U2AF1-212ENST00000496462 PRSS46E5RG02 174 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 FGF8P55075 233 aaPredicted RBP6.54□□□□□ -1.36
U2AF1-212ENST00000496462 IFITM2Q01629 132 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 ARL6IP6Q8N6S5 226 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 FAM110AQ9BQ89 295 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 IGHV3OR16-12A0A075B7B8 117 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 FLI1Q01543 452 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms