RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 K7EN84 100 aa12.63□□□□□ -0.39
CBX4-204ENST00000495122 ZNF253O75346 499 aa12.63□□□□□ -0.39
CBX4-204ENST00000495122 AMY1AP04745 511 aa12.63□□□□□ -0.39
CBX4-204ENST00000495122 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
CBX4-204ENST00000495122 IGLC2P0DOY2 106 aa12.63□□□□□ -0.39
CBX4-204ENST00000495122 RANP62826 216 aaKnown RBP12.63□□□□□ -0.39
CBX4-204ENST00000495122 RELQ04864 619 aaPredicted RBP12.63□□□□□ -0.39
CBX4-204ENST00000495122 COX19Q49B96 90 aa12.63□□□□□ -0.39
CBX4-204ENST00000495122 AP4M1O00189 453 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 UBE2CO00762 179 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
CBX4-204ENST00000495122 PSG9Q00887 426 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 USMG5Q96IX5 58 aa12.62□□□□□ -0.39
CBX4-204ENST00000495122 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 OR2T8A6NH00 312 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 K7EQM0 130 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 IGLV2-8P01709 118 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 TCRAP04437 139 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 MEOX2P50222 304 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
CBX4-204ENST00000495122 RPEL1Q2QD12 228 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 BAGE2Q86Y30 109 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 ZFP82Q8N141 532 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 CMTM2Q8TAZ6 248 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 ZNF747Q9BV97 191 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 TRRAPQ9Y4A5 3859 aa12.61□□□□□ -0.39
CBX4-204ENST00000495122 MGAM2Q2M2H8 2515 aa12.6□□□□□ -0.39
CBX4-204ENST00000495122 ADMP35318 185 aa12.6□□□□□ -0.39
CBX4-204ENST00000495122 C1orf194Q5T5A4 169 aa12.6□□□□□ -0.39
CBX4-204ENST00000495122 SAV1Q9H4B6 383 aaPredicted RBP12.6□□□□□ -0.39
CBX4-204ENST00000495122 PRDM13Q9H4Q3 707 aa12.6□□□□□ -0.39
CBX4-204ENST00000495122 V9GYV3 84 aa12.6□□□□□ -0.39
CBX4-204ENST00000495122 G3V318 75 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 IBA57Q5T440 356 aaKnown RBP12.59□□□□□ -0.39
CBX4-204ENST00000495122 LEMD1Q68G75 181 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 ZNF414Q96IQ9 312 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 MEGF8Q7Z7M0 2845 aa12.59□□□□□ -0.39
CBX4-204ENST00000495122 LTAP01374 205 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 TRGC2P03986 189 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 S100A8P05109 93 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
CBX4-204ENST00000495122 GPR183P32249 361 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 DEFB112Q30KQ8 113 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 CCDC140Q96MF4 163 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
CBX4-204ENST00000495122 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
CBX4-204ENST00000495122 A0A087X0K7 114 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 A0A0G2JLM5 398 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 PHOX2AO14813 284 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 CLEC3BP05452 202 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 SNRPEP62304 92 aaKnown RBP12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 CT83Q5H943 113 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
CBX4-204ENST00000495122 SHISA2Q6UWI4 295 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
CBX4-204ENST00000495122 LINC01548A6NM66 108 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 TRGV3P03979 118 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
CBX4-204ENST00000495122 CSN1S1P47710 185 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 LY6EQ16553 131 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 S4R3C0 116 aa12.56□□□□□ -0.4
CBX4-204ENST00000495122 SMIM27A0A1W2PRY6 76 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
CBX4-204ENST00000495122 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 MT-ND6P03923 174 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 HOXA5P20719 270 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 IER3P46695 156 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 GNG5P63218 68 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 WDR73Q6P4I2 378 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 Q6YL49 198 aa12.55□□□□□ -0.4
CBX4-204ENST00000495122 Q86TA4 180 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms