RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 HYPMO75409 117 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 ATP5G1P05496 136 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
SKA1-205ENST00000494518 CXCL3P19876 107 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 ATP5G3P48201 142 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -0.99
SKA1-205ENST00000494518 AP3S2P59780 193 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 LRRC20Q8TCA0 184 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
SKA1-205ENST00000494518 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 PSENENQ9NZ42 101 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 V9GYH0 126 aa8.84□□□□□ -0.99
SKA1-205ENST00000494518 H3BTX0 84 aa8.83□□□□□ -1
SKA1-205ENST00000494518 TSPOP30536 169 aa8.83□□□□□ -1
SKA1-205ENST00000494518 S100A7P31151 101 aa8.83□□□□□ -1
SKA1-205ENST00000494518 CCL18P55774 89 aa8.83□□□□□ -1
SKA1-205ENST00000494518 B2MP61769 119 aa8.83□□□□□ -1
SKA1-205ENST00000494518 SLC38A11Q08AI6 406 aa8.83□□□□□ -1
SKA1-205ENST00000494518 CLINT1Q14677 625 aa8.83□□□□□ -1
SKA1-205ENST00000494518 KIR3DS1Q14943 382 aa8.83□□□□□ -1
SKA1-205ENST00000494518 PSG3Q16557 428 aa8.83□□□□□ -1
SKA1-205ENST00000494518 MAPKAPK5-AS1Q8N8E1 139 aa8.83□□□□□ -1
SKA1-205ENST00000494518 BCL7BQ9BQE9 202 aa8.83□□□□□ -1
SKA1-205ENST00000494518 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
SKA1-205ENST00000494518 ARL6Q9H0F7 186 aa8.83□□□□□ -1
SKA1-205ENST00000494518 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
SKA1-205ENST00000494518 CBY3A6NI87 242 aa8.82□□□□□ -1
SKA1-205ENST00000494518 PMS2P5A8MQ11 134 aa8.82□□□□□ -1
SKA1-205ENST00000494518 SCGB1D2O95969 90 aa8.82□□□□□ -1
SKA1-205ENST00000494518 METTL15P1P0C7V9 234 aa8.82□□□□□ -1
SKA1-205ENST00000494518 ANXA7P20073 488 aaKnown RBP8.82□□□□□ -1
SKA1-205ENST00000494518 TAS2R60P59551 318 aa8.82□□□□□ -1
SKA1-205ENST00000494518 OR5I1Q13606 314 aa8.82□□□□□ -1
SKA1-205ENST00000494518 PATE2Q6UY27 113 aa8.82□□□□□ -1
SKA1-205ENST00000494518 SSX7Q7RTT5 188 aa8.82□□□□□ -1
SKA1-205ENST00000494518 RPUSD4Q96CM3 377 aaKnown RBP8.82□□□□□ -1
SKA1-205ENST00000494518 C16orf74Q96GX8 76 aa8.82□□□□□ -1
SKA1-205ENST00000494518 A0A087X0K7 114 aa8.81□□□□□ -1
SKA1-205ENST00000494518 A0A0J9YY99 117 aa8.81□□□□□ -1
SKA1-205ENST00000494518 C9orf170A2RU37 121 aa8.81□□□□□ -1
SKA1-205ENST00000494518 J3KRW8 73 aa8.81□□□□□ -1
SKA1-205ENST00000494518 ID3Q02535 119 aa8.81□□□□□ -1
SKA1-205ENST00000494518 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
SKA1-205ENST00000494518 ARV1Q9H2C2 271 aa8.81□□□□□ -1
SKA1-205ENST00000494518 FLVCR2Q9UPI3 526 aa8.81□□□□□ -1
SKA1-205ENST00000494518 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
SKA1-205ENST00000494518 TRAV26-1A0A087WT03 109 aa8.8□□□□□ -1
SKA1-205ENST00000494518 LINC00854A0A1B0GVQ3 168 aa8.8□□□□□ -1
SKA1-205ENST00000494518 PRAC2D3DTV9 90 aa8.8□□□□□ -1
SKA1-205ENST00000494518 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
SKA1-205ENST00000494518 CDKN1BP46527 198 aa8.8□□□□□ -1
SKA1-205ENST00000494518 PLP1P60201 277 aa8.8□□□□□ -1
SKA1-205ENST00000494518 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
SKA1-205ENST00000494518 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
SKA1-205ENST00000494518 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
SKA1-205ENST00000494518 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
SKA1-205ENST00000494518 GAGE12BA1L429 117 aa8.79□□□□□ -1
SKA1-205ENST00000494518 CCDC160A6NGH7 325 aa8.79□□□□□ -1
SKA1-205ENST00000494518 SLC17A3O00476 420 aa8.79□□□□□ -1
SKA1-205ENST00000494518 CDK2AP2O75956 126 aa8.79□□□□□ -1
SKA1-205ENST00000494518 GAGE7O76087 117 aa8.79□□□□□ -1
SKA1-205ENST00000494518 GAGE12FP0CL80 117 aa8.79□□□□□ -1
SKA1-205ENST00000494518 GAGE12GP0CL81 117 aa8.79□□□□□ -1
SKA1-205ENST00000494518 GAGE12IP0CL82 117 aa8.79□□□□□ -1
SKA1-205ENST00000494518 SELENOTP62341 195 aa8.79□□□□□ -1
SKA1-205ENST00000494518 DLK1P80370 383 aa8.79□□□□□ -1
SKA1-205ENST00000494518 CCDC190Q86UF4 302 aa8.79□□□□□ -1
SKA1-205ENST00000494518 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
SKA1-205ENST00000494518 Q9H8V8 135 aa8.79□□□□□ -1
SKA1-205ENST00000494518 MGAT4CQ9UBM8 478 aa8.79□□□□□ -1
SKA1-205ENST00000494518 HOXA5P20719 270 aa8.78□□□□□ -1
SKA1-205ENST00000494518 S100A5P33763 92 aa8.78□□□□□ -1
SKA1-205ENST00000494518 UBE2MP61081 183 aaKnown RBP8.78□□□□□ -1
SKA1-205ENST00000494518 ARL16Q0P5N6 197 aa8.78□□□□□ -1
SKA1-205ENST00000494518 GFI1BQ5VTD9 330 aa8.78□□□□□ -1
SKA1-205ENST00000494518 MORN5Q5VZ52 161 aa8.78□□□□□ -1
SKA1-205ENST00000494518 TEPPQ6URK8 271 aa8.78□□□□□ -1
SKA1-205ENST00000494518 LCN15Q6UWW0 184 aa8.78□□□□□ -1
SKA1-205ENST00000494518 TMEM14EPQ6UXP3 125 aa8.78□□□□□ -1
SKA1-205ENST00000494518 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
SKA1-205ENST00000494518 SMIM8Q96KF7 97 aa8.78□□□□□ -1
SKA1-205ENST00000494518 NPVFQ9HCQ7 196 aa8.78□□□□□ -1
SKA1-205ENST00000494518 ZNF331Q9NQX6 463 aaPredicted RBP8.78□□□□□ -1
SKA1-205ENST00000494518 H7BYZ3 331 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 ZNF701M0R085 212 aaPredicted RBP8.77□□□□□ -1.01
SKA1-205ENST00000494518 GOSR2O14653 212 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 COX7A2P2O60397 106 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 IAH1Q2TAA2 248 aaPredicted RBP8.77□□□□□ -1.01
SKA1-205ENST00000494518 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 OR10P1Q8NGE3 313 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 GSKIPQ9P0R6 139 aa8.77□□□□□ -1.01
SKA1-205ENST00000494518 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
SKA1-205ENST00000494518 TRAV12-3A0A0B4J271 114 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 AGPAT2O15120 278 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 NDUFB6O95139 128 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 OR4E1P0C645 316 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 M6PRP20645 277 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 INPP1P49441 399 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms