RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
COL25A1-204ENST00000494183 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
COL25A1-204ENST00000494183 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.42□□□□□ -0.9
COL25A1-204ENST00000494183 NDUFA3O95167 84 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 NDUFB8O95169 186 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
COL25A1-204ENST00000494183 DAZ1Q9NQZ3 744 aaKnown RBP9.42□□□□□ -0.9
COL25A1-204ENST00000494183 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 Q71RC1 249 aaPredicted RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 SETD2Q9BYW2 2564 aaPredicted RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 IGKV1-39P01597 117 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 IGLV3-1P01715 115 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 IGKV1D-39P04432 117 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 FXYD7P58549 80 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 TOMM40O96008 361 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 DIAPH2-AS1Q14236 149 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 TTC9CQ8N5M4 171 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 RNF138Q8WVD3 245 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 KIF26AQ9ULI4 1882 aaPredicted RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 SPTBN4Q9H254 2564 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 FAM223BA6NKX1 122 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
COL25A1-204ENST00000494183 FAM223AQ8IWN6 122 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 GNB1LQ9BYB4 327 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 DMRT1Q9Y5R6 373 aa9.41□□□□□ -0.9
COL25A1-204ENST00000494183 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
COL25A1-204ENST00000494183 PCDH15Q96QU1 1955 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 CXCL1P09341 107 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 SRSF8Q9BRL6 282 aaKnown RBP9.4□□□□□ -0.9
COL25A1-204ENST00000494183 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 NCR2O95944 276 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 PRB1P04280 392 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 CACNG7P62955 275 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL25A1-204ENST00000494183 LYZL1Q6UWQ5 148 aa9.4□□□□□ -0.9
COL25A1-204ENST00000494183 HBDP02042 147 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 LYL1P12980 280 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 C22orf46C9J442 243 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 ZNF833PQ6ZTB9 187 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 COPS9Q8WXC6 57 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 LINC00477Q96M19 166 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 ANAPC10Q9UM13 185 aa9.4□□□□□ -0.91
COL25A1-204ENST00000494183 SHISA9B4DS77 424 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 H3BRM9 83 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 TMEM249Q2WGJ8 235 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 C3orf56Q8N813 242 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 SPRY4Q9C004 299 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 FNDC10F2Z333 226 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 K7ERU9 68 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 PAX9P55771 341 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-204ENST00000494183 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 RCHY1Q96PM5 261 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 KAAG1Q9UBP8 84 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-204ENST00000494183 FOXL1Q12952 345 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 LYPD1Q8N2G4 141 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 LINC00311Q8N616 119 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
COL25A1-204ENST00000494183 SHANK2-AS3Q9BTD1 123 aa9.39□□□□□ -0.91
COL25A1-204ENST00000494183 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 DEFB131AP59861 70 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 COTL1Q14019 142 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 NIT1Q86X76 327 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 FAM110DQ8TAY7 271 aaPredicted RBP9.38□□□□□ -0.91
COL25A1-204ENST00000494183 PSG3Q16557 428 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 C2orf16Q68DN1 1984 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 WIPF3A6NGB9 483 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 A0A1B0GW64 132 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 COLCA2A8K830 154 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 APOMO95445 188 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 C11orf53Q8IXP5 236 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 CTSZQ9UBR2 303 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 RNF114Q9Y508 228 aa9.38□□□□□ -0.91
COL25A1-204ENST00000494183 NACAE9PAV3 2078 aa9.37□□□□□ -0.91
COL25A1-204ENST00000494183 WISP2O76076 250 aa9.37□□□□□ -0.91
COL25A1-204ENST00000494183 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
COL25A1-204ENST00000494183 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
COL25A1-204ENST00000494183 REG4Q9BYZ8 158 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms