RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 F2Z2F3 143 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CORTO00230 105 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 COX7A2P2O60397 106 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 FOXH1O75593 365 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 NDUFB8O95169 186 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 LIPFP07098 398 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 GLRXP35754 106 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 PROK1P58294 105 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TMEM177Q53S58 311 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CT45A1Q5HYN5 189 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF833PQ6ZTB9 187 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 STPG4Q8N801 248 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CT45A3Q8NHU0 189 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RCHY1Q96PM5 261 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CLEC7AQ9BXN2 247 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TNFRSF19Q9NS68 423 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 SERTAD4Q9NUC0 356 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RPUSD1Q9UJJ7 312 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 MYCNOSP40205 109 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 MFAP2P55001 183 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 CCL8P80075 99 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 SLAQ13239 276 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 Q6AWC8 147 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF329Q86UD4 541 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NUP35Q8NFH5 326 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM167AQ8TBQ9 72 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 GPR82Q96P67 336 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 GCM1Q9NP62 436 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NDUFA4L2Q9NRX3 87 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00312Q9Y6C7 94 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 IGLV3-9A0A075B6K5 115 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 TEX50A0A1B0GTY4 177 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 hADV38S2A0JD32 116 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PPIAL4GP0DN37 164 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 NTF3P20783 257 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF134P52741 427 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PLP1P60201 277 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00311Q8N616 119 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LYSTQ99698 3801 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF7Q9UBF6 113 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 IGKV1OR2-108A0A075B7D4 117 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 C17orf100A8MU93 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 ACTL6BO94805 426 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 CD33P20138 364 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 RPL8P62917 257 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 HIST1H1AQ02539 215 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 FXYD3Q14802 87 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TNXAQ16473 311 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SPRNQ5BIV9 151 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TEX36Q5VZQ5 186 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 RBPMS2Q6ZRY4 209 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 VKORC1L1Q8N0U8 176 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 LYG1Q8N1E2 194 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TPRX1Q8N7U7 411 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 OR5AN1Q8NGI8 311 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TIMD4Q96H15 378 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TRGV9Q99603 122 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 MLST8Q9BVC4 326 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 INSIG2Q9Y5U4 225 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 NPIPB6E9PJ23 425 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 IGHV4-38-2P0DP08 117 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 CEACAM3P40198 252 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF137PP52743 207 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms