RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 F2Z2F3 143 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CORTO00230 105 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 COX7A2P2O60397 106 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 FOXH1O75593 365 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 NDUFB8O95169 186 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 LIPFP07098 398 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 GLRXP35754 106 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 PROK1P58294 105 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TMEM177Q53S58 311 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CT45A1Q5HYN5 189 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 ZNF833PQ6ZTB9 187 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 STPG4Q8N801 248 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CT45A3Q8NHU0 189 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RCHY1Q96PM5 261 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 CLEC7AQ9BXN2 247 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TNFRSF19Q9NS68 423 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 SERTAD4Q9NUC0 356 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 RPUSD1Q9UJJ7 312 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
PDLIM1-205ENST00000493949 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 MYCNOSP40205 109 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 MFAP2P55001 183 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 CCL8P80075 99 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 SLAQ13239 276 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 Q6AWC8 147 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF329Q86UD4 541 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NUP35Q8NFH5 326 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM167AQ8TBQ9 72 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 GPR82Q96P67 336 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 GCM1Q9NP62 436 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 NDUFA4L2Q9NRX3 87 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00312Q9Y6C7 94 aa8.39□□□□□ -1.07
PDLIM1-205ENST00000493949 IGLV3-9A0A075B6K5 115 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 TEX50A0A1B0GTY4 177 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 hADV38S2A0JD32 116 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PPIAL4GP0DN37 164 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 NTF3P20783 257 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF134P52741 427 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PLP1P60201 277 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC00311Q8N616 119 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 LYSTQ99698 3801 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 PRSS22Q9GZN4 317 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 RNF7Q9UBF6 113 aa8.38□□□□□ -1.07
PDLIM1-205ENST00000493949 IGKV1OR2-108A0A075B7D4 117 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 C17orf100A8MU93 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 ACTL6BO94805 426 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 CD33P20138 364 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 RPL8P62917 257 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 HIST1H1AQ02539 215 aaPredicted RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 FXYD3Q14802 87 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TNXAQ16473 311 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SPRNQ5BIV9 151 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TEX36Q5VZQ5 186 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 RBPMS2Q6ZRY4 209 aaKnown RBP8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 VKORC1L1Q8N0U8 176 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 LYG1Q8N1E2 194 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TPRX1Q8N7U7 411 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 NUDT10Q8NFP7 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 OR4C5Q8NGB2 326 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 OR5AN1Q8NGI8 311 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 NUDT11Q96G61 164 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TIMD4Q96H15 378 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 TRGV9Q99603 122 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 MLST8Q9BVC4 326 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 INSIG2Q9Y5U4 225 aa8.37□□□□□ -1.07
PDLIM1-205ENST00000493949 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 NPIPB6E9PJ23 425 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 IGHV4-38-2P0DP08 117 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 CEACAM3P40198 252 aa8.36□□□□□ -1.07
PDLIM1-205ENST00000493949 ZNF137PP52743 207 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms