RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 GATA2P23769 480 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-213ENST00000492512 CDKN1BP46527 198 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 C15orf40Q8WUR7 153 aa9.42□□□□□ -0.9
GPNMB-213ENST00000492512 A0A0B4J2A0 478 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 J3QL48 77 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 SIVA1O15304 175 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 IAPPP10997 89 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 KRTAP10-1P60331 282 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 ICAM4Q14773 271 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 SPANXN2Q5MJ10 180 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 SHPKQ9UHJ6 478 aa9.41□□□□□ -0.9
GPNMB-213ENST00000492512 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
GPNMB-213ENST00000492512 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-213ENST00000492512 CXCL3P19876 107 aa9.4□□□□□ -0.9
GPNMB-213ENST00000492512 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.9
GPNMB-213ENST00000492512 PSG3Q16557 428 aa9.4□□□□□ -0.9
GPNMB-213ENST00000492512 RGS21Q2M5E4 152 aa9.4□□□□□ -0.9
GPNMB-213ENST00000492512 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.9
GPNMB-213ENST00000492512 A0A096LPF7 62 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 H3BRN7 92 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 AKAIN1P0CW23 69 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 RPL7P18124 248 aaKnown RBP9.39□□□□□ -0.91
GPNMB-213ENST00000492512 RAP2BP61225 183 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 Q6ZNX1 250 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
GPNMB-213ENST00000492512 CCDC190Q86UF4 302 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 PRRT1Q99946 306 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
GPNMB-213ENST00000492512 DNAH10OSP0CZ25 163 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 SRPXP78539 464 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 AKR1C1Q04828 323 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 Q6ZSN1 163 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 OR51S1Q8NGJ8 323 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 RPUSD4Q96CM3 377 aaKnown RBP9.38□□□□□ -0.91
GPNMB-213ENST00000492512 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 HIGD1AQ9Y241 93 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 TNFRSF18Q9Y5U5 241 aa9.38□□□□□ -0.91
GPNMB-213ENST00000492512 A0A087WTM6 91 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 UPK1BO75841 260 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 NXPH4O95158 308 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 ANXA3P12429 323 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 TNFSF8P32971 234 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 RPP30P78346 268 aaKnown RBP9.37□□□□□ -0.91
GPNMB-213ENST00000492512 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
GPNMB-213ENST00000492512 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 VSIG2Q96IQ7 327 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 SCGB3A2Q96PL1 93 aa9.37□□□□□ -0.91
GPNMB-213ENST00000492512 A0A087X0K7 114 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 A0A1B0GVG6 124 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 PRSS46E5RG02 174 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 CTDSP2O14595 271 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 RGS5O15539 181 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 IL5P05113 134 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 GCSHP23434 173 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 Q6ZTI0 123 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
GPNMB-213ENST00000492512 CIB3Q96Q77 187 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-213ENST00000492512 PARD6GQ9BYG4 376 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-213ENST00000492512 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 WRBO00258 174 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 PITX3O75364 302 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 HYPMO75409 117 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 MED6O75586 246 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 OR5G3P0C626 314 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 DEFA1P59665 94 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 DEFA3P59666 94 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 HAMPP81172 84 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 CYP2G1PQ6ZSU1 146 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 S100A7AQ86SG5 101 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 SMIM4Q8WVI0 70 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
GPNMB-213ENST00000492512 DUXBA0A1W2PPF3 345 aa9.34□□□□□ -0.91
GPNMB-213ENST00000492512 SMCO3A2RU48 225 aa9.34□□□□□ -0.91
GPNMB-213ENST00000492512 LINC00869P0C866 280 aa9.34□□□□□ -0.91
GPNMB-213ENST00000492512 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
GPNMB-213ENST00000492512 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
GPNMB-213ENST00000492512 SPANXN5Q5MJ07 72 aa9.34□□□□□ -0.91
GPNMB-213ENST00000492512 ACOT7LQ6ZUV0 252 aa9.34□□□□□ -0.91
GPNMB-213ENST00000492512 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 FABP12A6NFH5 140 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 PMS2P5A8MQ11 134 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 J3KRW8 73 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 SYNGR2O43760 224 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 PTTG1O95997 202 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 LCN15Q6UWW0 184 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 DIRAS2Q96HU8 199 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 ICOSQ9Y6W8 199 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 V9GYH0 126 aa9.33□□□□□ -0.92
GPNMB-213ENST00000492512 H3BP45 60 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms