RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, human

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX3-208	ENST00000491160	ADIRF	Q15847	76 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	C2orf83	Q53S99	150 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	LCN12	Q6JVE5	192 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	TEPP	Q6URK8	271 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	CYP2G1P	Q6ZSU1	146 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	FAM24B	Q8N5W8	94 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	STPG3	Q8N7X2	389 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	OR5T1	Q8NG75	326 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	OR1L8	Q8NGR8	309 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	TMPRSS5	Q9H3S3	457 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160	SIGLEC8	Q9NYZ4	499 aa		4.89	□□□□□ -1.63
PBX3-208	ENST00000491160		A0A0J9YWU9	116 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	TEX50	A0A1B0GTY4	177 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	NUPR2	A6NF83	97 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	ZNF785	A8K8V0	405 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	OR11H12	B2RN74	326 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	C11orf94	C9JXX5	98 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	TGOLN2	O43493	480 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	PAGE4	O60829	102 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	YIF1A	O95070	293 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	CXorf1	O96002	111 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	IGKV1-16	P04430	117 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	ARL14EPL	P0DKL9	152 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	RNASE2	P10153	161 aa	Known RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	DEFA4	P12838	97 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	EDN2	P20800	178 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	S100P	P25815	95 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	MC5R	P33032	325 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	RPL35	P42766	123 aa	Known RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	RPS10	P46783	165 aa	Known RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	CRIP2	P52943	208 aa	Predicted RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	UBE2G2	P60604	165 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	PLGLA	Q15195	96 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	CD300E	Q496F6	205 aa	Predicted RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	CST9LP1	Q5W188	147 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	SLC16A13	Q7RTY0	426 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	OR5AN1	Q8NGI8	311 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	TMEM167A	Q8TBQ9	72 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	TMEM170A	Q8WVE7	144 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	TXNDC17	Q9BRA2	123 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	OVOL2	Q9BRP0	275 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	CTDSP1	Q9GZU7	261 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	PARL	Q9H300	379 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	SDF2L1	Q9HCN8	221 aa		4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	SRRM2	Q9UQ35	2752 aa	Known RBP	4.88	□□□□□ -1.63
PBX3-208	ENST00000491160	SRRM4	A7MD48	611 aa	Known RBP	4.87	□□□□□ -1.63
PBX3-208	ENST00000491160		H7BYZ3	331 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	PDE6D	O43924	150 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	STAG3L2	P0CL84	134 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	STAG3L3	P0CL85	134 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	OR10J1	P30954	320 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	MAS1L	P35410	378 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	RPL29	P47914	159 aa	Known RBP	4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	ATP5G3	P48201	142 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	SUB1	P53999	127 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	TAS2R45	P59539	299 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	TMEM241	Q24JQ0	296 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	BSX	Q3C1V8	233 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	GCSAML	Q5JQS6	135 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	TMEM144	Q7Z5S9	345 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160		Q8WTZ3	238 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	UHRF2	Q96PU4	802 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	RNF2	Q99496	336 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	PEF1	Q9UBV8	284 aa	Known RBP	4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	URGCP-MRPS24	S4R325	110 aa		4.87	□□□□□ -1.63
PBX3-208	ENST00000491160	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160		A0A0G2JLM5	398 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	INS-IGF2	F8WCM5	200 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ACTL6B	O94805	426 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	GCHFR	P30047	84 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	RPL27A	P46776	148 aa	Known RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	LGALS7	P47929	136 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	RND2	P52198	227 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	RPL23	P62829	140 aa	Known RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ELOB	Q15370	118 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	TNXA	Q16473	311 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	RPEL1	Q2QD12	228 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	FAM78B	Q5VT40	261 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	SPATA31B1P	Q5VZV4	182 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	LGALS9C	Q6DKI2	356 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ZNF343	Q6P1L6	599 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	KCNIP4	Q6PIL6	250 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ZNF562	Q6V9R5	426 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	MMD2	Q8IY49	270 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ANAPC16	Q96DE5	110 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ACY3	Q96HD9	319 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	YPEL4	Q96NS1	127 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	TCEAL7	Q9BRU2	100 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	MRPL32	Q9BYC8	188 aa	Known RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	NDUFA4L2	Q9NRX3	87 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	TMEM167B	Q9NRX6	74 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	METTL1	Q9UBP6	276 aa	Known RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	SLC45A2	Q9UMX9	530 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	FUT9	Q9Y231	359 aa		4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	KLK5	Q9Y337	293 aa	Predicted RBP	4.86	□□□□□ -1.63
PBX3-208	ENST00000491160	PPP1R2P9	O14990	202 aa		4.85	□□□□□ -1.63
PBX3-208	ENST00000491160	COX7A2P2	O60397	106 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms