RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PPYP01298 95 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 IFNA4P05014 189 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 OGNP20774 298 aaKnown RBP0.56□□□□□ -2.32
CD46-216ENST00000490278 VBP1P61758 197 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 SNCBQ16143 134 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 SPATA8Q6RVD6 105 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 TMEM14EPQ6UXP3 125 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 PBDC1Q9BVG4 233 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 MAP1LC3BQ9GZQ8 125 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 WFDC10AQ9H1F0 79 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 SIP14410 1827 aa0.56□□□□□ -2.32
CD46-216ENST00000490278 ASCC3Q8N3C0 2202 aaKnown RBP0.56□□□□□ -2.32
CD46-216ENST00000490278 NCAPD3P42695 1498 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 MYO5AQ9Y4I1 1855 aaKnown RBP0.55□□□□□ -2.32
CD46-216ENST00000490278 TRAV5A0A0B4J249 113 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 hDV103S1A0JD37 113 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 RER1O15258 196 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 IFNA1P01562 189 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 LRRC18Q8N456 261 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 OR13C6PQ8NH95 151 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 MALSU1Q96EH3 234 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 PRRT1Q99946 306 aa0.55□□□□□ -2.32
CD46-216ENST00000490278 MGAMO43451 1857 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 CHD3Q12873 2000 aaKnown RBP0.54□□□□□ -2.32
CD46-216ENST00000490278 K7ERJ3 54 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 RPL19P84098 196 aaKnown RBP0.54□□□□□ -2.32
CD46-216ENST00000490278 MSMO1Q15800 293 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 SPATA45Q537H7 98 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 OR10AC1Q8NH08 325 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 GINS3Q9BRX5 216 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 TCEAL2Q9H3H9 227 aaPredicted RBP0.54□□□□□ -2.32
CD46-216ENST00000490278 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 SS18L2Q9UHA2 77 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 HSPB8Q9UJY1 196 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 STOML2Q9UJZ1 356 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 ASB4Q9Y574 426 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 MYLKQ15746 1914 aa0.54□□□□□ -2.32
CD46-216ENST00000490278 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
CD46-216ENST00000490278 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
CD46-216ENST00000490278 ODAMA1E959 279 aa0.53□□□□□ -2.32
CD46-216ENST00000490278 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
CD46-216ENST00000490278 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
CD46-216ENST00000490278 BASP1P80723 227 aaKnown RBP0.53□□□□□ -2.32
CD46-216ENST00000490278 EIF3IQ13347 325 aaKnown RBP0.53□□□□□ -2.32
CD46-216ENST00000490278 GLIPR1L1Q6UWM5 242 aa0.53□□□□□ -2.32
CD46-216ENST00000490278 TMED4Q7Z7H5 227 aa0.53□□□□□ -2.32
CD46-216ENST00000490278 ZFC3H1O60293 1989 aaKnown RBP0.53□□□□□ -2.32
CD46-216ENST00000490278 TRPM1Q7Z4N2 1603 aa0.53□□□□□ -2.33
CD46-216ENST00000490278 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 CITO14578 2027 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 FREM3P0C091 2139 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 TRAV23DV6A0A075B6W5 121 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 C9orf170A2RU37 121 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 LYRM1O43325 122 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 PPP1R2P41236 205 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 C1orf140Q5VVS0 124 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 NUP35Q8NFH5 326 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 CAMSAP2Q08AD1 1489 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 PTPRFP10586 1907 aa0.52□□□□□ -2.33
CD46-216ENST00000490278 C5orf67F2Z3F1 127 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 GPR31O00270 319 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 MFSD11O43934 449 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 IDO1P14902 403 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
CD46-216ENST00000490278 EIF3AQ14152 1382 aaKnown RBP0.51□□□□□ -2.33
CD46-216ENST00000490278 POU6F1Q14863 301 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 SPINK9Q5DT21 86 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 NUP210LQ5VU65 1888 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 CD109Q6YHK3 1445 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 PHF5AQ7RTV0 110 aaKnown RBP0.51□□□□□ -2.33
CD46-216ENST00000490278 TET1Q8NFU7 2136 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 AP3S1Q92572 193 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 RTL8AQ9BWD3 113 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 NISCHQ9Y2I1 1504 aa0.51□□□□□ -2.33
CD46-216ENST00000490278 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 A0A096LPI6 279 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 K7EIL1 84 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 CSN2P05814 226 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 GNG3P63215 75 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 HBBP68871 147 aa0.5□□□□□ -2.33
CD46-216ENST00000490278 CD14P08571 375 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 RPL35P42766 123 aaKnown RBP0.49□□□□□ -2.33
CD46-216ENST00000490278 FOXA3P55318 350 aaPredicted RBP0.49□□□□□ -2.33
CD46-216ENST00000490278 FKBP1CQ5VVH2 108 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 SMIM20Q8N5G0 67 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 FAM216BQ8N7L0 139 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 PLEKHB2Q96CS7 222 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 OR2H1Q9GZK4 316 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 NIT2Q9NQR4 276 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 RNF11Q9Y3C5 154 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 FRMPD1Q5SYB0 1578 aa0.49□□□□□ -2.33
CD46-216ENST00000490278 A0A0D9SG42 100 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 CST7O76096 145 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 IGHV3-33P01772 117 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 TAS2R41P59536 307 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 MIR22HGQ0VDD5 57 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 RTL8BQ17RB0 113 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 FOXI2Q6ZQN5 318 aa0.48□□□□□ -2.33
CD46-216ENST00000490278 LYG2Q86SG7 212 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms