RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 RNF125Q96EQ8 232 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 ZNF414Q96IQ9 312 aa8.46□□□□□ -1.06
COL21A1-211ENST00000488912 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
COL21A1-211ENST00000488912 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 TCF21O43680 179 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 SCGB2A1O75556 95 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 SLC35B1P78383 322 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 TMEM241Q24JQ0 296 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 WI2-2373I1.2A0A1W2PRP0 233 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 CIDEAO60543 219 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 CXorf1O96002 111 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 TRBV12-3P01733 135 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 RNF2Q99496 336 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 NIPSNAP3BQ9BS92 247 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 SLC25A2Q9BXI2 301 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 SRD5A3Q9H8P0 318 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 TECRQ9NZ01 308 aaKnown RBP8.45□□□□□ -1.06
COL21A1-211ENST00000488912 HIGD1AQ9Y241 93 aa8.45□□□□□ -1.06
COL21A1-211ENST00000488912 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 C8orf88P0DMB2 117 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 ATP6V0BQ99437 205 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 C20orf144Q9BQM9 153 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 PYGO2Q9BRQ0 406 aa8.44□□□□□ -1.06
COL21A1-211ENST00000488912 MRPL27Q9P0M9 148 aaKnown RBP8.44□□□□□ -1.06
COL21A1-211ENST00000488912 IGHV3OR16-8A0A075B7F1 116 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 LOC102723971A0A1B0GUV8 181 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 TMEM89A2RUT3 159 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 OR7C2O60412 319 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 BCL2P10415 239 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 GCHFRP30047 84 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 TAS2R45P59539 299 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 FOXE3Q13461 319 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 LEMD1Q68G75 181 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 OR5AU1Q8NGC0 362 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 OR4X2Q8NGF9 303 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.43□□□□□ -1.06
COL21A1-211ENST00000488912 PPBPP02775 128 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 ARL3P36405 182 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 PSMB3P49720 205 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 RPL15P61313 204 aaKnown RBP8.43□□□□□ -1.06
COL21A1-211ENST00000488912 FAM90A2PQ658T7 463 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 OR5B12Q96R08 314 aa8.43□□□□□ -1.06
COL21A1-211ENST00000488912 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
COL21A1-211ENST00000488912 AURKAIP1Q9NWT8 199 aaPredicted RBP8.43□□□□□ -1.06
COL21A1-211ENST00000488912 IFNA1P01562 189 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 ELANEP08246 267 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 OR10J4P0C629 311 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PMS2P11Q13670 270 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 TOMM20LQ6UXN7 152 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PQLC2Q6ZP29 291 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 MYOZ3Q8TDC0 251 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 MIEN1Q9BRT3 115 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 ZFAND3Q9H8U3 227 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PRSS47A8MTI9 375 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 HSBP1L1C9JCN9 74 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PAGE4O60829 102 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 PYYP10082 97 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 CEBPGP53567 150 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 UBE2G2P60604 165 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 COL5A1-AS1Q5SY13 56 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 RNF152Q8N8N0 203 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
COL21A1-211ENST00000488912 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 H3BRN7 92 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 OR5I1Q13606 314 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-211ENST00000488912 GBGT1Q8N5D6 347 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 SHANK2-AS3Q9BTD1 123 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 BMPR1BO00238 502 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 CRLF1O75462 422 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 UBE2L3P68036 154 aaKnown RBP8.41□□□□□ -1.06
COL21A1-211ENST00000488912 MEF2BQ02080 365 aaPredicted RBP8.41□□□□□ -1.06
COL21A1-211ENST00000488912 ORAOV1Q8WV07 137 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 PAXXQ9BUH6 204 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 NAGKQ9UJ70 344 aa8.41□□□□□ -1.06
COL21A1-211ENST00000488912 GP9P14770 177 aa8.4□□□□□ -1.06
COL21A1-211ENST00000488912 SRSF2Q01130 221 aaKnown RBP8.4□□□□□ -1.06
COL21A1-211ENST00000488912 SMIM15Q7Z3B0 74 aa8.4□□□□□ -1.06
COL21A1-211ENST00000488912 TMEM167BQ9NRX6 74 aa8.4□□□□□ -1.06
COL21A1-211ENST00000488912 PEF1Q9UBV8 284 aaKnown RBP8.4□□□□□ -1.06
COL21A1-211ENST00000488912 YTHDF2Q9Y5A9 579 aaKnown RBP8.4□□□□□ -1.06
COL21A1-211ENST00000488912 CLPSL1A2RUU4 121 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 ATP5G3P48201 142 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 RANP62826 216 aaKnown RBP8.4□□□□□ -1.07
COL21A1-211ENST00000488912 MAJINQ3KP22 176 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 TCTEX1D4Q5JR98 221 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 LINC01006Q8NI28 216 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 FXYD5Q96DB9 178 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 SDF2L1Q9HCN8 221 aa8.4□□□□□ -1.07
COL21A1-211ENST00000488912 RABAC1Q9UI14 185 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms