RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 NUP35Q8NFH5 326 aa12.46□□□□□ -0.42
PKD1-220ENST00000487932 ATP6V0BQ99437 205 aa12.46□□□□□ -0.42
PKD1-220ENST00000487932 LINC01549A6NIU2 74 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 TRIOBPQ9H2D6 2365 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 C9JAW5 83 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
PKD1-220ENST00000487932 IGKV1-39P01597 117 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 IGKV1D-39P04432 117 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 CFHR2P36980 270 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 HAMPP81172 84 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
PKD1-220ENST00000487932 IGKV1-27A0A075B6S5 117 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 RFNGQ9Y644 331 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 G3V318 75 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 SMIM2Q9BVW6 85 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 THADAQ6YHU6 1953 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 IGHG3P01860 377 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 CHD5Q8TDI0 1954 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
PKD1-220ENST00000487932 TCTEX1D4Q5JR98 221 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 AGMATQ9BSE5 352 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 COL4A5P29400 1685 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 TCF15Q12870 199 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 RNF5Q99942 180 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 LINC00473A8K010 186 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 CRYGSP22914 178 aa12.43□□□□□ -0.42
PKD1-220ENST00000487932 IGHV4-4A0A075B6R2 117 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 IGHV1-69DA0A0B4J2H0 117 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 SOCS3O14543 225 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 IGHV1-69P01742 117 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 NTF4P34130 210 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 GLRX5Q86SX6 157 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 RPL18AQ02543 176 aaKnown RBP12.42□□□□□ -0.42
PKD1-220ENST00000487932 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
PKD1-220ENST00000487932 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 NDUFS8O00217 210 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 ID3Q02535 119 aa12.42□□□□□ -0.42
PKD1-220ENST00000487932 CRLF1O75462 422 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 UBE2E1P51965 193 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 Q6ZQT7 251 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 SCN4AP35499 1836 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 IGLV3-32A0A0A0MS00 114 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
PKD1-220ENST00000487932 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
PKD1-220ENST00000487932 ABCA4P78363 2273 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 H0YIZ8 118 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
PKD1-220ENST00000487932 NEGR1Q7Z3B1 354 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BKO60814 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BJP06899 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BOP23527 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BBP33778 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BDP58876 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BCP62807 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST2H2BEQ16778 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BHQ93079 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BNQ99877 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 HIST1H2BMQ99879 126 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 PRB2P02812 416 aaPredicted RBP12.4□□□□□ -0.42
PKD1-220ENST00000487932 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 BRWD3Q6RI45 1802 aa12.4□□□□□ -0.42
PKD1-220ENST00000487932 IGKV1-16P04430 117 aa12.4□□□□□ -0.43
PKD1-220ENST00000487932 KIF13BQ9NQT8 1826 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 C5orf63A6NC05 138 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 CXCL1P09341 107 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 FER1L5A0AVI2 2057 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 I3L3M4 83 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 FLVCR1-AS1Q8TAF5 88 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 TMEM213A2RRL7 107 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 DSCR8Q96T75 97 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
PKD1-220ENST00000487932 GATA3P23771 443 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 NDUFB8O95169 186 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 GAS1P54826 345 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 AMBPP02760 352 aa12.38□□□□□ -0.43
PKD1-220ENST00000487932 FANCMQ8IYD8 2048 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 STPG4Q8N801 248 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 YLPM1P49750 1951 aaKnown RBP12.37□□□□□ -0.43
PKD1-220ENST00000487932 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 XCL1P47992 114 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 TINCRA0A1B0GVN0 87 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
PKD1-220ENST00000487932 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms