RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 KHDC3LQ587J8 217 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 FFAR4Q5NUL3 377 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 FAM78BQ5VT40 261 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 DPPA3Q6W0C5 159 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 DEFB125Q8N687 156 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 SAV1Q9H4B6 383 aaPredicted RBP4.91□□□□□ -1.62
PTPRE-209ENST00000487428 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 SLC25A22Q9H936 323 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 RPRMQ9NS64 109 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 PPP1R14DQ9NXH3 145 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 DOK5Q9P104 306 aa4.91□□□□□ -1.62
PTPRE-209ENST00000487428 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 TRAV8-2A0A0B4J237 113 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 KANTRA0A1W2PQU2 76 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 H3BMM0 161 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 BCL2L11O43521 198 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 AMBPP02760 352 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 SLC25A5P05141 298 aaKnown RBP4.9□□□□□ -1.63
PTPRE-209ENST00000487428 NBEAP1P0C6P0 100 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 STAG3L2P0CL84 134 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 STAG3L3P0CL85 134 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 C4BPBP20851 252 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
PTPRE-209ENST00000487428 PSG9Q00887 426 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 LGALSLQ3ZCW2 172 aaPredicted RBP4.9□□□□□ -1.63
PTPRE-209ENST00000487428 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 RPL7L1Q6DKI1 246 aaKnown RBP4.9□□□□□ -1.63
PTPRE-209ENST00000487428 SBSPONQ8IVN8 264 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 RPP25LQ8N5L8 163 aaKnown RBP4.9□□□□□ -1.63
PTPRE-209ENST00000487428 FAM24BQ8N5W8 94 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 ODF3Q96PU9 254 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 SPATA25Q9BR10 227 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 SLC25A2Q9BXI2 301 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 C1QTNF4Q9BXJ3 329 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 SMIM3Q9BZL3 60 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 OR51M1Q9H341 326 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 ARL2-SNX15V9GYD0 113 aa4.9□□□□□ -1.63
PTPRE-209ENST00000487428 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
PTPRE-209ENST00000487428 A0A0J9YX75 114 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 RBAKDNA6NC62 111 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 H3BQ15 152 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 DUSP14O95147 198 aaKnown RBP4.89□□□□□ -1.63
PTPRE-209ENST00000487428 NDUFB4O95168 129 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 NMBP08949 121 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF688P0C7X2 276 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
PTPRE-209ENST00000487428 RAB5CP51148 216 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 PMS2P11Q13670 270 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 PSG3Q16557 428 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 GCSAMLQ5JQS6 135 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 PSMG4Q5JS54 123 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 LEMD1Q68G75 181 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 EIF5AL1Q6IS14 154 aaKnown RBP4.89□□□□□ -1.63
PTPRE-209ENST00000487428 TMUB2Q71RG4 321 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 STHQ8IWL8 128 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 BAP18Q8IXM2 172 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 HSD17B11Q8NBQ5 300 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 OR10G4Q8NGN3 311 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 OR10G9Q8NGN4 311 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 OR10G7Q8NGN6 311 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF503Q96F45 646 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 PHYHIPLQ96FC7 376 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 C16orf92Q96LL3 132 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 PAXXQ9BUH6 204 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 NKX6-2Q9C056 277 aaPredicted RBP4.89□□□□□ -1.63
PTPRE-209ENST00000487428 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 WFDC10AQ9H1F0 79 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 ZMAT4Q9H898 229 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF586Q9NXT0 402 aa4.89□□□□□ -1.63
PTPRE-209ENST00000487428 IGKV3-7A0A075B6H7 116 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 TRAV1-1A0A0B4J248 108 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 TRAV5A0A0B4J249 113 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 CTXND1A0A1B0GTU2 59 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 SERTM2A0A1B0GWG4 89 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 FBLL1A6NHQ2 334 aaKnown RBP4.88□□□□□ -1.63
PTPRE-209ENST00000487428 SMLR1H3BR10 107 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 CXorf1O96002 111 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 GIG44P09565 113 aaPredicted RBP4.88□□□□□ -1.63
PTPRE-209ENST00000487428 TPT1P13693 172 aaKnown RBP4.88□□□□□ -1.63
PTPRE-209ENST00000487428 TFPI2P48307 235 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 RAB2AP61019 212 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 EBLN2Q6P2I7 272 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 AMTNQ6UX39 209 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 C9orf47Q6ZRZ4 202 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 MIR17HGQ75NE6 70 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 SLC51BQ86UW2 128 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 APRG1Q8IVJ8 170 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 CSNK1G2-AS1Q8NCQ2 148 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 OR8A1Q8NGG7 326 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 RNF141Q8WVD5 230 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 MBD3L1Q8WWY6 194 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 RNF183Q96D59 192 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 NEU1Q99519 415 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 C20orf144Q9BQM9 153 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms