RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CA1P00915 261 aaPredicted RBP8.32□□□□□ -1.08
TRIM56-204ENST00000487252 HRASP01112 189 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 BCL2P10415 239 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 FGF7P21781 194 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 ELLP55199 621 aaPredicted RBP8.32□□□□□ -1.08
TRIM56-204ENST00000487252 OR2B8PP59922 312 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 FLI1Q01543 452 aaPredicted RBP8.32□□□□□ -1.08
TRIM56-204ENST00000487252 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 AIFM2Q9BRQ8 373 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 X6R8D5 127 aa8.32□□□□□ -1.08
TRIM56-204ENST00000487252 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
TRIM56-204ENST00000487252 CTXND1A0A1B0GTU2 59 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 MAP1LC3B2A6NCE7 125 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 UPK2O00526 184 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 MPDU1O75352 247 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
TRIM56-204ENST00000487252 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 ARL3P36405 182 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 ATP5IP56385 69 aaPredicted RBP8.31□□□□□ -1.08
TRIM56-204ENST00000487252 HSPE1P61604 102 aaKnown RBP8.31□□□□□ -1.08
TRIM56-204ENST00000487252 RXFP4Q8TDU9 374 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 TMEM170AQ8WVE7 144 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 PRNDQ9UKY0 176 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 ZNF257Q9Y2Q1 563 aa8.31□□□□□ -1.08
TRIM56-204ENST00000487252 A0A087WWC5 75 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 H3BQ15 152 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 IFNA1P01562 189 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 BTF3P20290 206 aaKnown RBP8.3□□□□□ -1.08
TRIM56-204ENST00000487252 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
TRIM56-204ENST00000487252 SPINK9Q5DT21 86 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 LCN15Q6UWW0 184 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 PDPNQ86YL7 162 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 VKORC1L1Q8N0U8 176 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 TTC9CQ8N5M4 171 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 HEYLQ9NQ87 328 aaPredicted RBP8.3□□□□□ -1.08
TRIM56-204ENST00000487252 VAX2Q9UIW0 290 aa8.3□□□□□ -1.08
TRIM56-204ENST00000487252 INS-IGF2F8WCM5 200 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 M0R036 132 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 OR2J3O76001 311 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 MT-ND4LP03901 98 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 MYOD1P15172 320 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 OPRK1P41145 380 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 RTL8BQ17RB0 113 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 SMUG1Q53HV7 270 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 FFAR4Q5NUL3 377 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 CLEC19AQ6UXS0 136 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 Q6ZSN1 163 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 OSR1Q8TAX0 266 aaPredicted RBP8.29□□□□□ -1.08
TRIM56-204ENST00000487252 HIST1H2BAQ96A08 127 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 ACTR3CQ9C0K3 210 aaPredicted RBP8.29□□□□□ -1.08
TRIM56-204ENST00000487252 SLC35D1Q9NTN3 355 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 SLC39A9Q9NUM3 307 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 BET1LQ9NYM9 111 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 GNG13Q9P2W3 67 aa8.29□□□□□ -1.08
TRIM56-204ENST00000487252 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
TRIM56-204ENST00000487252 B4DEV8 164 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 KBTBD11O94819 623 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 PRCDQ00LT1 54 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 KLK9Q2XQG4 91 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 BSXQ3C1V8 233 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 ACOT6Q3I5F7 207 aaPredicted RBP8.28□□□□□ -1.08
TRIM56-204ENST00000487252 MORN3Q6PF18 240 aaPredicted RBP8.28□□□□□ -1.08
TRIM56-204ENST00000487252 ZNF709Q8N972 641 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
TRIM56-204ENST00000487252 TVP23CQ96ET8 276 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 KLK9Q9UKQ9 250 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 UFC1Q9Y3C8 167 aa8.28□□□□□ -1.08
TRIM56-204ENST00000487252 PUS1Q9Y606 427 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRIM56-204ENST00000487252 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 CYB5BO43169 146 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 TGOLN2O43493 480 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 YIF1AO95070 293 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 APOA2P02652 100 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 NPY1RP25929 384 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 HOXA1P49639 335 aaPredicted RBP8.27□□□□□ -1.09
TRIM56-204ENST00000487252 FGF8P55075 233 aaPredicted RBP8.27□□□□□ -1.09
TRIM56-204ENST00000487252 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
TRIM56-204ENST00000487252 RAB11AP62491 216 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 SLC24A4Q8NFF2 622 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 RAB24Q969Q5 203 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 KRTAP4-6Q9BYQ5 205 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 MANBALQ9NQG1 85 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 OR51B2Q9Y5P1 312 aa8.27□□□□□ -1.09
TRIM56-204ENST00000487252 LRP2P98164 4655 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
TRIM56-204ENST00000487252 TMEM250H0YL14 139 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms