RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 DYNLRB1Q9NP97 96 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 SIGLEC8Q9NYZ4 499 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 RALYQ9UKM9 306 aaKnown RBP9.62□□□□□ -0.87
COL3A1-206ENST00000487010 ASPMQ8IZT6 3477 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 SERTM2A0A1B0GWG4 89 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 D6R8Y8 96 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 KLK10O43240 276 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 APOBEC3AP31941 199 aaPredicted RBP9.62□□□□□ -0.87
COL3A1-206ENST00000487010 PLGLAQ15195 96 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 OR8A1Q8NGG7 326 aa9.62□□□□□ -0.87
COL3A1-206ENST00000487010 LOC389332A0A1B0GUA5 103 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 GAGE12BA1L429 117 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 M0R3E3 92 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 CT45A10P0DMU9 189 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 RPEQ96AT9 228 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 RNF5Q99942 180 aa9.61□□□□□ -0.87
COL3A1-206ENST00000487010 WI2-2373I1.2A0A1W2PRP0 233 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 CNIH1O95406 144 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 IL4P05112 153 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 FCGR2BP31994 310 aaPredicted RBP9.6□□□□□ -0.87
COL3A1-206ENST00000487010 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 VPS25Q9BRG1 176 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 CFAP47Q6ZTR5 3102 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 TMEM189A5PLL7 270 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 SHISA9B4DS77 424 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 E7EQL1 145 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 COX7A1P24310 79 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 NHLH1Q02575 133 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 ORMDL3Q8N138 153 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 JKAMPQ9P055 326 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 RABAC1Q9UI14 185 aa9.6□□□□□ -0.87
COL3A1-206ENST00000487010 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 LY6LH3BQJ8 138 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 PRRG2O14669 202 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 ABCA1O95477 2261 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 TMSB15BA0A087X1C1 80 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 H3BRM9 83 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 SH2D1AO60880 128 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 UQCRFS1P47985 274 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 PAX8Q06710 450 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 PDE6HQ13956 83 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 AAMDCQ9H7C9 122 aa9.59□□□□□ -0.87
COL3A1-206ENST00000487010 SMG1Q96Q15 3661 aaKnown RBP9.58□□□□□ -0.88
COL3A1-206ENST00000487010 ZGRF1Q86YA3 2104 aa9.58□□□□□ -0.88
COL3A1-206ENST00000487010 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
COL3A1-206ENST00000487010 HBDP02042 147 aa9.58□□□□□ -0.88
COL3A1-206ENST00000487010 CACNG7P62955 275 aa9.58□□□□□ -0.88
COL3A1-206ENST00000487010 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
COL3A1-206ENST00000487010 BCL6BQ8N143 479 aaPredicted RBP9.58□□□□□ -0.88
COL3A1-206ENST00000487010 CUL9Q8IWT3 2517 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 PPIAL4CA0A0B4J2A2 164 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 A6NDN8 102 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
COL3A1-206ENST00000487010 PPIAL4GP0DN37 164 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 SMIM15Q7Z3B0 74 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 S100A7AQ86SG5 101 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 SH3BGRL2Q9UJC5 107 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 ROS1P08922 2347 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 A1L4Q6 167 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 K7ERU9 68 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 TIMM23O14925 209 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 SIVA1O15304 175 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 FXYD7P58549 80 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 RAB1BQ9H0U4 201 aa9.57□□□□□ -0.88
COL3A1-206ENST00000487010 LYNX1G3V0Z9 82 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 GNG7O60262 68 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 LYNX1P0DP58 116 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 HSD52Q0P140 79 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 KLF17Q5JT82 389 aaPredicted RBP9.56□□□□□ -0.88
COL3A1-206ENST00000487010 GFRALQ6UXV0 394 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 GTF2H5Q6ZYL4 71 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 S4R3C0 116 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 BOD1L1Q8NFC6 3051 aa9.56□□□□□ -0.88
COL3A1-206ENST00000487010 NBR2O15453 112 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 CKS2P33552 79 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 JMJD8Q96S16 334 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 THYN1Q9P016 225 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
COL3A1-206ENST00000487010 SMKR1H3BMG3 65 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 NDUFS7O75251 213 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 NPYP01303 97 aa9.55□□□□□ -0.88
COL3A1-206ENST00000487010 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
COL3A1-206ENST00000487010 EGR2P11161 476 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms