RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 J3QLW9 94 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 ATOX1O00244 68 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 CDX4O14627 284 aaPredicted RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 NDUFB2O95178 105 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 CRIP2P52943 208 aaPredicted RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 LIM2P55344 173 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 RTL8BQ17RB0 113 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 LGALS9BQ3B8N2 356 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 DGAT2L6Q6ZPD8 337 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 ZNF493Q6ZR52 646 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 TRAPPC6BQ86SZ2 158 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 DRAM1Q8N682 238 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 C3orf56Q8N813 242 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 MORN4Q8NDC4 146 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 BORCS8Q96FH0 119 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 RPP25Q9BUL9 199 aaKnown RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 EMC6Q9BV81 110 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 HES7Q9BYE0 225 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 SRXN1Q9BYN0 137 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 AICDAQ9GZX7 198 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 GLIPR2Q9H4G4 154 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 DPH3P1Q9H4G8 78 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 ZNF665Q9H7R5 613 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 FAM60AQ9NP50 221 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 STARD5Q9NSY2 213 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 RPUSD1Q9UJJ7 312 aaKnown RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 KLK13Q9UKR3 277 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 KLK5Q9Y337 293 aaPredicted RBP4.18□□□□□ -1.74
COPS3-209ENST00000486810 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 ZNF236Q9UL36 1845 aa4.18□□□□□ -1.74
COPS3-209ENST00000486810 THSD7BQ9C0I4 1608 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 TRBV7-6A0A0J9YX20 115 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 CST7O76096 145 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 GAS8-AS1O95177 125 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 TCL1BO95988 128 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 ACYP1P07311 99 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 GP1BBP13224 206 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 CTLA4P16410 223 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 HERV-K104P61576 105 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 HBG1P69891 147 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 HBG2P69892 147 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 DAZ2Q13117 558 aaKnown RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 MLF2Q15773 248 aaPredicted RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 RSPO1Q2MKA7 263 aaPredicted RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 KIAA2026Q5HYC2 2103 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 WDR38Q5JTN6 314 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 FAM219BQ5XKK7 198 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 DAZ4Q86SG3 579 aaKnown RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 PCP2Q8IVA1 136 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 RNF182Q8N6D2 247 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 FAM3DQ96BQ1 224 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 CXCL16Q9H2A7 254 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 DAZ1Q9NQZ3 744 aaKnown RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 DAZ3Q9NR90 486 aaKnown RBP4.17□□□□□ -1.74
COPS3-209ENST00000486810 CKLFQ9UBR5 152 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 PLXNB3Q9ULL4 1909 aa4.17□□□□□ -1.74
COPS3-209ENST00000486810 BRWD3Q6RI45 1802 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 SCN2AQ99250 2005 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 TRAV17A0A0B4J275 112 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 TCRBV4S1A1TA0A5B7 111 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 KNCNA6PVL3 124 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 C2CD4DB7Z1M9 353 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 K7EMT4 169 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 SLC25A14O95258 325 aaPredicted RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 DUTP33316 252 aaKnown RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 RPL30P62888 115 aaKnown RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 CCL8P80075 99 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
COPS3-209ENST00000486810 SP6Q3SY56 376 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 DEFB121Q5J5C9 76 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 LGALS9CQ6DKI2 356 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 C6orf201Q7Z4U5 140 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 GTSCR1Q86UQ5 136 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 RAB42Q8N4Z0 105 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 DCAF4L2Q8NA75 395 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 RFESDQ8TAC1 157 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 IGF2BP2-AS1Q96M15 143 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 GPX7Q96SL4 187 aaPredicted RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 MGST2Q99735 147 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 ZNF286AQ9HBT8 521 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 ZNF256Q9Y2P7 627 aaPredicted RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 AMMECR1Q9Y4X0 333 aaPredicted RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 TIMM9Q9Y5J7 89 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 PTPRDP23468 1912 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 PAPPA2Q9BXP8 1791 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 KIF26BQ2KJY2 2108 aa4.16□□□□□ -1.74
COPS3-209ENST00000486810 COL2A1P02458 1487 aaPredicted RBP4.16□□□□□ -1.74
COPS3-209ENST00000486810 UBR3Q6ZT12 1888 aa4.15□□□□□ -1.74
COPS3-209ENST00000486810 SNRNP200O75643 2136 aaKnown RBP4.15□□□□□ -1.74
COPS3-209ENST00000486810 TRAV8-2A0A0B4J237 113 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 MED19A0JLT2 244 aaPredicted RBP4.15□□□□□ -1.75
COPS3-209ENST00000486810 PMS2P5A8MQ11 134 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 TSHBP01222 138 aa4.15□□□□□ -1.75
COPS3-209ENST00000486810 SSR2P43308 183 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms