RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MRAP2Q96G30 205 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
CCDC171-208ENST00000486641 ZMAT4Q9H898 229 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 URB1O60287 2271 aaKnown RBP8.43□□□□□ -1.06
CCDC171-208ENST00000486641 TMSB15BA0A087X1C1 80 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 IGLV2-23P01705 113 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 APELAP0DMC3 54 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 Q6AWC8 147 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 FAM216BQ8N7L0 139 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 OR10X1Q8NGY0 326 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 FER1L6-AS2Q96M78 137 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 GAFA1Q96PS6 74 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF71Q9NQZ8 489 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-208ENST00000486641 HIGD1AQ9Y241 93 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 SVILO95425 2214 aa8.43□□□□□ -1.06
CCDC171-208ENST00000486641 PATE3B3GLJ2 98 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 IGLV1-44P01699 117 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 KIR2DL2P43627 348 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-208ENST00000486641 LYZP61626 148 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 ODF1Q14990 250 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 GTSCR1Q86UQ5 136 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 TMEM105Q8N8V8 129 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 MDS2Q8NDY4 140 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 OR4C13Q8NGP0 309 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 RITA1Q96K30 269 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-208ENST00000486641 PRRC2CQ9Y520 2896 aaKnown RBP8.42□□□□□ -1.06
CCDC171-208ENST00000486641 CKS2P33552 79 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 PRO0461Q9UI25 63 aa8.42□□□□□ -1.06
CCDC171-208ENST00000486641 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 MC5RP33032 325 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 MRGPRG-AS1Q2M3A8 158 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 C12orf74Q32Q52 190 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF48Q96MX3 618 aaPredicted RBP8.41□□□□□ -1.06
CCDC171-208ENST00000486641 C20orf78Q9BR46 151 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 TMEM14CQ9P0S9 112 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 CFAP47Q6ZTR5 3102 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 TM4SF5O14894 197 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 IGKCP01834 107 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 ZNF502Q8TBZ5 544 aa8.41□□□□□ -1.06
CCDC171-208ENST00000486641 PRRG2O14669 202 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 PRSS1P07477 247 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 EVI2AP22794 236 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 LEPP41159 167 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
CCDC171-208ENST00000486641 RNF7Q9UBF6 113 aa8.4□□□□□ -1.06
CCDC171-208ENST00000486641 TRBV19A0A075B6N1 114 aa8.4□□□□□ -1.07
CCDC171-208ENST00000486641 VSTM5A8MXK1 200 aa8.4□□□□□ -1.07
CCDC171-208ENST00000486641 SHISA9B4DS77 424 aa8.4□□□□□ -1.07
CCDC171-208ENST00000486641 SRSF1Q07955 248 aaKnown RBP eCLIP8.4□□□□□ -1.07
CCDC171-208ENST00000486641 SPRY4Q9C004 299 aa8.4□□□□□ -1.07
CCDC171-208ENST00000486641 TMEM133Q9H2Q1 129 aa8.4□□□□□ -1.07
CCDC171-208ENST00000486641 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 CCL3L1P16619 93 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
CCDC171-208ENST00000486641 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 ZC2HC1BQ5TFG8 222 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 PMS2CLQ68D20 193 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
CCDC171-208ENST00000486641 C1orf162Q8NEQ5 155 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-208ENST00000486641 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 M0R3E3 92 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 TWIST1Q15672 202 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 KLF17Q5JT82 389 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-208ENST00000486641 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 NGBQ9NPG2 151 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 DKK4Q9UBT3 224 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 LINC00312Q9Y6C7 94 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 AGRNO00468 2067 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 TMEM8BA6NDV4 472 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 SH2D1AO60880 128 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 FCER1GP30273 86 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 TTC9CQ8N5M4 171 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 C9orf106Q8NAJ2 232 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 FOXC2Q99958 501 aa8.38□□□□□ -1.07
CCDC171-208ENST00000486641 AHCTF1Q8WYP5 2266 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 APOMO95445 188 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 IGFBP4P22692 258 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 FOXI1Q12951 378 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 VMA21Q3ZAQ7 101 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-208ENST00000486641 TMEM160Q9NX00 188 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 TRAV40A0A0B4J280 105 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 DPM2O94777 84 aa8.37□□□□□ -1.07
CCDC171-208ENST00000486641 TMEM178AQ8NBL3 297 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms