RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MGAMO43451 1857 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 UHRF1BP1Q6BDS2 1440 aa0.37□□□□□ -2.35
LTN1-206ENST00000486427 N4BP2Q86UW6 1770 aaPredicted RBP0.37□□□□□ -2.35
LTN1-206ENST00000486427 MYH2Q9UKX2 1941 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 G3V2T6 193 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 ATG12O94817 140 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 CXCL1P09341 107 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 FOXA3P55318 350 aaPredicted RBP0.36□□□□□ -2.35
LTN1-206ENST00000486427 ARPP19P56211 112 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 ARF6P62330 175 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 ZHX1-C8orf76Q96EF9 292 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 GPX7Q96SL4 187 aaPredicted RBP0.36□□□□□ -2.35
LTN1-206ENST00000486427 CACYBPQ9HB71 228 aaKnown RBP0.36□□□□□ -2.35
LTN1-206ENST00000486427 CHD3Q12873 2000 aaKnown RBP0.36□□□□□ -2.35
LTN1-206ENST00000486427 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 ERBINQ96RT1 1412 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 PTPRFP10586 1907 aa0.36□□□□□ -2.35
LTN1-206ENST00000486427 MYH3P11055 1940 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 TRAV5A0A0B4J249 113 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 H7C1C5 153 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 TRGC2P03986 189 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 LCN6P62502 163 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 MRPS15P82914 257 aaKnown RBP0.35□□□□□ -2.35
LTN1-206ENST00000486427 KLRD1Q13241 179 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 SCGB2B2Q4G0G5 96 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 SPINK9Q5DT21 86 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 OR4K15Q8NH41 348 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 PAIP2Q9BPZ3 127 aaKnown RBP0.35□□□□□ -2.35
LTN1-206ENST00000486427 WFDC10AQ9H1F0 79 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 SH3BGRL3Q9H299 93 aa0.35□□□□□ -2.35
LTN1-206ENST00000486427 LYRM2Q9NU23 88 aaPredicted RBP0.35□□□□□ -2.35
LTN1-206ENST00000486427 FREM3P0C091 2139 aa0.34□□□□□ -2.35
LTN1-206ENST00000486427 hDV103S1A0JD37 113 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 RIIAD1A6NNX1 92 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 K7ERJ3 54 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 TMBIM6P55061 237 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 VBP1P61758 197 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 CIRBPQ14011 172 aaKnown RBP0.34□□□□□ -2.36
LTN1-206ENST00000486427 SPATA45Q537H7 98 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 HACD4Q5VWC8 232 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 CD109Q6YHK3 1445 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 OR10AC1Q8NH08 325 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 CEP19Q96LK0 163 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 ZNF714Q96N38 554 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 SMR3AQ99954 134 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 HSPB8Q9UJY1 196 aa0.34□□□□□ -2.36
LTN1-206ENST00000486427 BCL9O00512 1426 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 C9orf170A2RU37 121 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 IFNA14P01570 189 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 OGNP20774 298 aaKnown RBP0.33□□□□□ -2.36
LTN1-206ENST00000486427 PHBP35232 272 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 AKR1C8PQ5T2L2 129 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 LRRC18Q8N456 261 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 CDC26Q8NHZ8 85 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 GINS3Q9BRX5 216 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 SS18L2Q9UHA2 77 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 SSR3Q9UNL2 185 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 CAMSAP2Q08AD1 1489 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 ZNF462Q96JM2 2506 aa0.33□□□□□ -2.36
LTN1-206ENST00000486427 FANCMQ8IYD8 2048 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 C5orf67F2Z3F1 127 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 RER1O15258 196 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 HIST1H2BKO60814 126 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 PIAS1O75925 651 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 IFNA4P05014 189 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 HIST1H2BJP06899 126 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 CD14P08571 375 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 BASP1P80723 227 aaKnown RBP0.32□□□□□ -2.36
LTN1-206ENST00000486427 EIF3IQ13347 325 aaKnown RBP0.32□□□□□ -2.36
LTN1-206ENST00000486427 MSMO1Q15800 293 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 SNCBQ16143 134 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 IFT20Q8IY31 132 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 ATOH7Q8N100 152 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 MAP1LC3BQ9GZQ8 125 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 KCPQ6ZWJ8 1503 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 MUC4Q99102 2169 aa0.32□□□□□ -2.36
LTN1-206ENST00000486427 EIF3AQ14152 1382 aaKnown RBP0.32□□□□□ -2.36
LTN1-206ENST00000486427 ODAMA1E959 279 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 MFSD11O43934 449 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 APOA2P02652 100 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 IDO1P14902 403 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 C1orf140Q5VVS0 124 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 PHF5AQ7RTV0 110 aaKnown RBP0.31□□□□□ -2.36
LTN1-206ENST00000486427 SMIM20Q8N5G0 67 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 NUP35Q8NFH5 326 aa0.31□□□□□ -2.36
LTN1-206ENST00000486427 TCEAL2Q9H3H9 227 aaPredicted RBP0.31□□□□□ -2.36
LTN1-206ENST00000486427 PIK3C2AO00443 1686 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 TRAV23DV6A0A075B6W5 121 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 IFNA1P01562 189 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 IGHV3-33P01772 117 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 CSN2P05814 226 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 KRTAP2-3P0C7H8 128 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 TAS2R41P59536 307 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 GNG3P63215 75 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 RPL19P84098 196 aaKnown RBP0.3□□□□□ -2.36
LTN1-206ENST00000486427 LYG2Q86SG7 212 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 OR13C6PQ8NH95 151 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 AP3S1Q92572 193 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 MALSU1Q96EH3 234 aa0.3□□□□□ -2.36
LTN1-206ENST00000486427 CARD19Q96LW7 228 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms