RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CLEC5AQ9NY25 188 aa9.27□□□□□ -0.93
PKP4-213ENST00000486254 ASH1LQ9NR48 2969 aaKnown RBP9.27□□□□□ -0.93
PKP4-213ENST00000486254 CSPG4Q6UVK1 2322 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 CR1P17927 2039 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 CLPSL1A2RUU4 121 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 DIRC3C9JPN6 131 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 S100A2P29034 98 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 PSG3Q16557 428 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 EXOC3-AS1Q8N2X6 119 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 TEX29Q8N6K0 151 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
PKP4-213ENST00000486254 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 RPP21Q9H633 154 aaKnown RBP9.26□□□□□ -0.93
PKP4-213ENST00000486254 NAT8BQ9UHF3 227 aa9.26□□□□□ -0.93
PKP4-213ENST00000486254 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.25□□□□□ -0.93
PKP4-213ENST00000486254 A0A0G2JLM5 398 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 IFITM10A6NMD0 228 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 A8MWL6 223 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 TRGV3P03979 118 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 IGHV4-31P0DP07 118 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 Q5PR19 223 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 CLEC19AQ6UXS0 136 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 METTL26Q96S19 204 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 C12orf57Q99622 126 aa9.25□□□□□ -0.93
PKP4-213ENST00000486254 XKRY2A2RUG3 117 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 NDUFA4O00483 81 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 TGFAP01135 160 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 P01737 135 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 IGHV3-23P01764 117 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 IER3P46695 156 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 BCL6BQ8N143 479 aaPredicted RBP9.24□□□□□ -0.93
PKP4-213ENST00000486254 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 ZNF331Q9NQX6 463 aaPredicted RBP9.24□□□□□ -0.93
PKP4-213ENST00000486254 SH2D7A6NKC9 451 aaPredicted RBP9.24□□□□□ -0.93
PKP4-213ENST00000486254 H3BTX0 84 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 FOXA3P55318 350 aaPredicted RBP9.24□□□□□ -0.93
PKP4-213ENST00000486254 SAPCD1Q5SSQ6 148 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 CIARTQ8N365 385 aaPredicted RBP9.24□□□□□ -0.93
PKP4-213ENST00000486254 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 SERTAD4Q9NUC0 356 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
PKP4-213ENST00000486254 SNURFLB1AK76 121 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 SNRPCP09234 159 aaKnown RBP9.23□□□□□ -0.93
PKP4-213ENST00000486254 ESDP10768 282 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 CBLN1P23435 193 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 TPPP2P59282 170 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 KRTAP10-9P60411 292 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 S100A12P80511 92 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 Q0VG73 95 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 LY6EQ16553 131 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 DEFB112Q30KQ8 113 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 Q6AWC8 147 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 GBGT1Q8N5D6 347 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 DAZAP1Q96EP5 407 aaKnown RBP9.23□□□□□ -0.93
PKP4-213ENST00000486254 PACRGQ96M98 296 aaPredicted RBP9.23□□□□□ -0.93
PKP4-213ENST00000486254 NEU1Q99519 415 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
PKP4-213ENST00000486254 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
PKP4-213ENST00000486254 FBN2P35556 2912 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 RNF223E7ERA6 249 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 IGHG4P01861 327 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 ARL3P36405 182 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 C9orf152Q5JTZ5 239 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 KRTAP1-3Q8IUG1 177 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 NUP35Q8NFH5 326 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 MS4A10Q96PG2 267 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 HIST1H2BLQ99880 126 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 GPR61Q9BZJ8 451 aa9.22□□□□□ -0.93
PKP4-213ENST00000486254 KMT2BQ9UMN6 2715 aaPredicted RBP9.22□□□□□ -0.93
PKP4-213ENST00000486254 TRAV8-1A0A0A6YYK1 113 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 HIGD1CA8MV81 97 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 COL8A1P27658 744 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 PRR27Q6MZM9 219 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 Q6YL49 198 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 RBPMS2Q6ZRY4 209 aaKnown RBP9.21□□□□□ -0.93
PKP4-213ENST00000486254 PRNTQ86SH4 94 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 GNB4Q9HAV0 340 aa9.21□□□□□ -0.93
PKP4-213ENST00000486254 A0A1B0GW15 77 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 M0R3E3 92 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 CHEK1O14757 476 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 CT45A10P0DMU9 189 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 BLCAPP62952 87 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 SRSF2Q01130 221 aaKnown RBP9.2□□□□□ -0.94
PKP4-213ENST00000486254 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 CYB5R2Q6BCY4 276 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
PKP4-213ENST00000486254 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 TMEM18Q96B42 140 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 POLQO75417 2590 aa9.2□□□□□ -0.94
PKP4-213ENST00000486254 A0A1W2PS18 150 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms