RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
VTI1A-205ENST00000483122 HIGD1BQ9P298 99 aa9.38□□□□□ -0.91
VTI1A-205ENST00000483122 U3KQK5 164 aa9.38□□□□□ -0.91
VTI1A-205ENST00000483122 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 MED13Q9UHV7 2174 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 HOXB4P17483 251 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-205ENST00000483122 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
VTI1A-205ENST00000483122 FAM104BQ5XKR9 115 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 HCP5Q6MZN7 132 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 CEND1Q8N111 149 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 FER1L6-AS2Q96M78 137 aa9.37□□□□□ -0.91
VTI1A-205ENST00000483122 ZNF48Q96MX3 618 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-205ENST00000483122 RAI1Q7Z5J4 1906 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-205ENST00000483122 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 A0A1B0GW15 77 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 MC5RP33032 325 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 ORMDL3Q8N138 153 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-205ENST00000483122 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 NPYP01303 97 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 SUB1P53999 127 aaKnown RBP eCLIP9.36□□□□□ -0.91
VTI1A-205ENST00000483122 TMEM164Q5U3C3 297 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 DEFB108BQ8NET1 73 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 RPUSD1Q9UJJ7 312 aaKnown RBP9.36□□□□□ -0.91
VTI1A-205ENST00000483122 HHLA3Q9XRX5 114 aa9.36□□□□□ -0.91
VTI1A-205ENST00000483122 DMXL1Q9Y485 3027 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 A0A1W2PPI3 338 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 APELAP0DMC3 54 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 MBNL2Q5VZF2 373 aaKnown RBP9.35□□□□□ -0.91
VTI1A-205ENST00000483122 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-205ENST00000483122 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 TRGV9Q99603 122 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 PRO0461Q9UI25 63 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 LHBP01229 141 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 KIR2DL2P43627 348 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-205ENST00000483122 ODF1Q14990 250 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 GAGE13Q4V321 117 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 TMEM167AQ8TBQ9 72 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
VTI1A-205ENST00000483122 PTPRZ1P23471 2315 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-205ENST00000483122 PRRG2O14669 202 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 MZT1Q08AG7 82 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 DIAPH2-AS1Q14236 149 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 C8orf46Q8TAG6 207 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 PIFOQ8TCI5 191 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 CCL13Q99616 98 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 CRYGCP07315 174 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 TNFRSF1AP19438 455 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 PPIFP30405 207 aaKnown RBP9.34□□□□□ -0.91
VTI1A-205ENST00000483122 LYZP61626 148 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 Q6ZT83 130 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 FAM216BQ8N7L0 139 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 CNEP1R1Q8N9A8 125 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
VTI1A-205ENST00000483122 AGRNO00468 2067 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 CEP250Q9BV73 2442 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 TRGV5A0A0B4J1U4 118 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 IGHV1-18A0A0C4DH31 117 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 SPRY3O43610 288 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 C12orf74Q32Q52 190 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 ZMAT4Q9H898 229 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 ZNF71Q9NQZ8 489 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-205ENST00000483122 TRBV6-1A0A0K0K1D8 114 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 IGLV2-23P01705 113 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 GATA3P23771 443 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 CKS2P33552 79 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 OR10X1Q8NGY0 326 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 RITA1Q96K30 269 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
VTI1A-205ENST00000483122 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
VTI1A-205ENST00000483122 Q6AWC8 147 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 SLC25A39Q9BZJ4 359 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-205ENST00000483122 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 LINC00312Q9Y6C7 94 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 AHCTF1Q8WYP5 2266 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 A0A1B0GWB2 263 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 IGKCP01834 107 aa9.32□□□□□ -0.92
VTI1A-205ENST00000483122 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 PRSS1P07477 247 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 LEPP41159 167 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 MRGPRG-AS1Q2M3A8 158 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms