RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SMCO1Q147U7 214 aa10.05□□□□□ -0.8
HDAC6-224ENST00000481929 STEAP1BQ6NZ63 245 aa10.05□□□□□ -0.8
HDAC6-224ENST00000481929 CCDC190Q86UF4 302 aa10.05□□□□□ -0.8
HDAC6-224ENST00000481929 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
HDAC6-224ENST00000481929 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-224ENST00000481929 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-224ENST00000481929 PAIP2BQ9ULR5 123 aaKnown RBP10.05□□□□□ -0.8
HDAC6-224ENST00000481929 FUT9Q9Y231 359 aa10.05□□□□□ -0.8
HDAC6-224ENST00000481929 A0A087X0K7 114 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 LRCOL1A6NCL2 159 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 CRYM-AS1A6NIL9 109 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 RAP2BP61225 183 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
HDAC6-224ENST00000481929 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 WFDC10BQ8IUB3 73 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 C10orf126Q8N4M7 172 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 Q8N814 137 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 PYGO2Q9BRQ0 406 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 SHANK2-AS3Q9BTD1 123 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 RAB26Q9ULW5 256 aa10.04□□□□□ -0.8
HDAC6-224ENST00000481929 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 J3KRW8 73 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 RAB3DO95716 219 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 NEDD8Q15843 81 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 TMEM182Q6ZP80 229 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-224ENST00000481929 OR52I2Q8NH67 350 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 HIGD1AQ9Y241 93 aa10.03□□□□□ -0.8
HDAC6-224ENST00000481929 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 CRYGDP07320 174 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 AKR1C4P17516 323 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 SLAQ13239 276 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 SURF2Q15527 256 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-224ENST00000481929 Q6ZSA8 131 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 ZNF680Q8NEM1 530 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 GSN-AS1Q9NRJ2 163 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 MTFP1Q9UDX5 166 aa10.02□□□□□ -0.81
HDAC6-224ENST00000481929 IAPPP10997 89 aa10.01□□□□□ -0.81
HDAC6-224ENST00000481929 TAS2R19P59542 299 aa10.01□□□□□ -0.81
HDAC6-224ENST00000481929 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
HDAC6-224ENST00000481929 AKR1C1Q04828 323 aa10.01□□□□□ -0.81
HDAC6-224ENST00000481929 TMEM229BQ8NBD8 167 aa10.01□□□□□ -0.81
HDAC6-224ENST00000481929 PRR13Q9NZ81 148 aa10.01□□□□□ -0.81
HDAC6-224ENST00000481929 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 A0A0B4J2A0 478 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 HPGDSO60760 199 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 IGHV3-53P01767 116 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 CXCL2P19875 107 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 LEPP41159 167 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 CRYBA4P53673 196 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 ST6GAL2Q96JF0 529 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 SHPKQ9UHJ6 478 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
HDAC6-224ENST00000481929 FAM25AB3EWG3 89 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 FAM25CB3EWG5 89 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 FAM25GB3EWG6 89 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 PRAF2O60831 178 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 HYPMO75409 117 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 OR5G3P0C626 314 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 SRIP30626 198 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 LCN15Q6UWW0 184 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 LYZL2Q7Z4W2 148 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 S100A7AQ86SG5 101 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 LRTM2Q8N967 370 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 C8orf49Q96NF6 230 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 ZNF331Q9NQX6 463 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-224ENST00000481929 GPR132Q9UNW8 380 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 HHLA3Q9XRX5 114 aa9.99□□□□□ -0.81
HDAC6-224ENST00000481929 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 PRSS46E5RG02 174 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 ANKRD65E5RJM6 399 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 SPINK4O60575 86 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 IL5P05113 134 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 CYP2G1PQ6ZSU1 146 aa9.98□□□□□ -0.81
HDAC6-224ENST00000481929 ZNF431Q8TF32 576 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-224ENST00000481929 PMS2P5A8MQ11 134 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 DISC1C4P0D8 188 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 PRAC2D3DTV9 90 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 LINC00869P0C866 280 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 ANXA7P20073 488 aaKnown RBP9.97□□□□□ -0.81
HDAC6-224ENST00000481929 KRTAP10-4P60372 401 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-224ENST00000481929 RPP30P78346 268 aaKnown RBP9.97□□□□□ -0.81
HDAC6-224ENST00000481929 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 PCNPQ8WW12 178 aaKnown RBP9.97□□□□□ -0.81
HDAC6-224ENST00000481929 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 VGLL1Q99990 258 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 RNF24Q9Y225 148 aa9.97□□□□□ -0.81
HDAC6-224ENST00000481929 RCL1Q9Y2P8 373 aaKnown RBP9.97□□□□□ -0.81
HDAC6-224ENST00000481929 LINC00854A0A1B0GVQ3 168 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 E5RGE8 158 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 CT45A10P0DMU9 189 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 TCL1AP56279 114 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 TEPPQ6URK8 271 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
HDAC6-224ENST00000481929 ZBTB8BQ8NAP8 495 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-224ENST00000481929 CIB3Q96Q77 187 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms