RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SIGLEC15Q6ZMC9 328 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 ZNF492Q9P255 531 aa12.26□□□□□ -0.45
RXRA-202ENST00000481739 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
RXRA-202ENST00000481739 IGHG2P01859 326 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 S100A2P29034 98 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 GPR183P32249 361 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 RELQ04864 619 aaPredicted RBP12.25□□□□□ -0.45
RXRA-202ENST00000481739 CT83Q5H943 113 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 IL17RELQ6ZVW7 336 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 C12orf57Q99622 126 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 YAE1D1Q9NRH1 226 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
RXRA-202ENST00000481739 G3V318 75 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 CD5LO43866 347 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 ATP5G2Q06055 141 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 GRAMD2BQ96HH9 432 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 ZFHX3Q15911 3703 aa12.25□□□□□ -0.45
RXRA-202ENST00000481739 ACANP16112 2415 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 IGHV3-23P01764 117 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
RXRA-202ENST00000481739 Q86TA4 180 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 OR8I2Q8N0Y5 310 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 TEX29Q8N6K0 151 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 SERTAD4Q9NUC0 356 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
RXRA-202ENST00000481739 SH2D7A6NKC9 451 aaPredicted RBP12.23□□□□□ -0.45
RXRA-202ENST00000481739 CLEC3BP05452 202 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 XKRY2A2RUG3 117 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 H3BTX0 84 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 CSN1S1P47710 185 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 C1orf194Q5T5A4 169 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 C9orf139Q6ZV77 190 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 EXOC3-AS1Q8N2X6 119 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 NUDT11Q96G61 164 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
RXRA-202ENST00000481739 MXRA5Q9NR99 2828 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
RXRA-202ENST00000481739 IGHV4-59P01825 116 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 KRTAP1-1Q07627 177 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 TOMM20LQ6UXN7 152 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
RXRA-202ENST00000481739 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.45
RXRA-202ENST00000481739 DAZAP1Q96EP5 407 aaKnown RBP12.21□□□□□ -0.45
RXRA-202ENST00000481739 PRSS22Q9GZN4 317 aa12.21□□□□□ -0.45
RXRA-202ENST00000481739 A0A087X0K7 114 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 FAM231BA6NCW3 169 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 A8MWL6 223 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 IGLV2-11P01706 119 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 HLA-DQA1P01909 254 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 IER3P46695 156 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 PSG3Q16557 428 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 PRR27Q6MZM9 219 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.46
RXRA-202ENST00000481739 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.46
RXRA-202ENST00000481739 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.46
RXRA-202ENST00000481739 C19orf71A6NCJ1 209 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 IFITM10A6NMD0 228 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 DIRC3C9JPN6 131 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 P01737 135 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 TRGV3P03979 118 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 PPIFP30405 207 aaKnown RBP12.2□□□□□ -0.46
RXRA-202ENST00000481739 FAM209BQ5JX69 171 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 OR5R1Q8NH85 324 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 METTL26Q96S19 204 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
RXRA-202ENST00000481739 OTOGQ6ZRI0 2925 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 SONP18583 2426 aaKnown RBP12.19□□□□□ -0.46
RXRA-202ENST00000481739 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 BUB3O43684 328 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 CBLN1P23435 193 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 Q6YL49 198 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 MS4A10Q96PG2 267 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 GPR61Q9BZJ8 451 aa12.19□□□□□ -0.46
RXRA-202ENST00000481739 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
RXRA-202ENST00000481739 ZNF331Q9NQX6 463 aaPredicted RBP12.18□□□□□ -0.46
RXRA-202ENST00000481739 A0A0G2JLM5 398 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 GFI1BQ5VTD9 330 aa12.18□□□□□ -0.46
RXRA-202ENST00000481739 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms