RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 OR4E1P0C645 316 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 IL7P13232 177 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 BTCP35070 178 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 DEFB1P60022 68 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 SNRPD3P62318 126 aaKnown RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 AKR1C1Q04828 323 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 THAP8Q8NA92 274 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 COQ8AQ8NI60 647 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 PHLDA1Q8WV24 401 aaPredicted RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 RAB40CQ96S21 281 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 TRGV9Q99603 122 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 SLC25A22Q9H936 323 aa4.42□□□□□ -1.7
VPS50-215ENST00000480943 KLK5Q9Y337 293 aaPredicted RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 STRAPQ9Y3F4 350 aaKnown RBP4.42□□□□□ -1.7
VPS50-215ENST00000480943 A0A087WYN8 130 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 SNRPGP15A8MWD9 76 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 CCNKO75909 580 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 IFNA21P01568 189 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 HLA-DRB4P13762 266 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 GATA2P23769 480 aaPredicted RBP4.41□□□□□ -1.7
VPS50-215ENST00000480943 ID1P41134 155 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 NKX2-1P43699 371 aaPredicted RBP4.41□□□□□ -1.7
VPS50-215ENST00000480943 FXYD7P58549 80 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 RRAS2P62070 204 aaPredicted RBP4.41□□□□□ -1.7
VPS50-215ENST00000480943 POLR2GP62487 172 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS50-215ENST00000480943 TMEM41BQ5BJD5 291 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 GDF5OSQ5U4N7 250 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 GFI1BQ5VTD9 330 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 OR8I2Q8N0Y5 310 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 Q8NAQ8 132 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 BPIFCQ8NFQ6 507 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 OR4D5Q8NGN0 318 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 LINC00052Q96N35 136 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 C7orf50Q9BRJ6 194 aaKnown RBP4.41□□□□□ -1.7
VPS50-215ENST00000480943 MFFQ9GZY8 342 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 C20orf85Q9H1P6 137 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 PSENENQ9NZ42 101 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 XCL2Q9UBD3 114 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 HLA-DRB4X5D2U9 266 aa4.41□□□□□ -1.7
VPS50-215ENST00000480943 ZNF705EA8MWA4 302 aaPredicted RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 H3BMM0 161 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 SOCS3O14543 225 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 CCSO14618 274 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 LYRM1O43325 122 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 RBMY1A1P0DJD3 496 aaKnown RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 RBMY1CP0DJD4 496 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 MIFP14174 115 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 ORM2P19652 201 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 PSMB3P49720 205 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 NUTF2P61970 127 aaKnown RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 RBMY1FQ15415 496 aaKnown RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 IAH1Q2TAA2 248 aaPredicted RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 C1orf194Q5T5A4 169 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 TMEM182Q6ZP80 229 aaPredicted RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 OR4B1Q8NGF8 309 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 OR1B1Q8NGR6 318 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 DOK5Q9P104 306 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 TBC1D24Q9ULP9 559 aa4.4□□□□□ -1.71
VPS50-215ENST00000480943 RCL1Q9Y2P8 373 aaKnown RBP4.4□□□□□ -1.71
VPS50-215ENST00000480943 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 TRAV6A0A075B6T7 132 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 IGHV3OR16-12A0A075B7B8 117 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 PMS2P5A8MQ11 134 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 F6UB75 175 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 H3BRN7 92 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 PLA2G10O15496 165 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 CFDP00746 253 aaPredicted RBP4.39□□□□□ -1.71
VPS50-215ENST00000480943 IL5P05113 134 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 METTL15P1P0C7V9 234 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 HLA-DMBP28068 263 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 GALR1P47211 349 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 PAX9P55771 341 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 FGL1Q08830 312 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 CNPY1Q3B7I2 92 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 FOXI2Q6ZQN5 318 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 ZNF767PQ75MW2 155 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 TMEM144Q7Z5S9 345 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 MITD1Q8WV92 249 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 SMIM8Q96KF7 97 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 SEC22CQ9BRL7 303 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 TMEM147Q9BVK8 224 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 SCRT1Q9BWW7 348 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 SAV1Q9H4B6 383 aaPredicted RBP4.39□□□□□ -1.71
VPS50-215ENST00000480943 NDUFA13Q9P0J0 144 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 GSKIPQ9P0R6 139 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
VPS50-215ENST00000480943 LSM5Q9Y4Y9 91 aaKnown RBP4.39□□□□□ -1.71
VPS50-215ENST00000480943 TRAV10A0A0B4J240 114 aa4.38□□□□□ -1.71
VPS50-215ENST00000480943 FAM25EA8MYX2 175 aa4.38□□□□□ -1.71
VPS50-215ENST00000480943 IGLL5B9A064 214 aa4.38□□□□□ -1.71
VPS50-215ENST00000480943 C11orf94C9JXX5 98 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms