RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 DHRS4L2Q6PKH6 230 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 OOSP2Q86WS3 158 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 CLVS1Q8IUQ0 354 aaPredicted RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 GDPD1Q8N9F7 314 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 OR4D11Q8NGI4 311 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 SLC25A40Q8TBP6 338 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 WFDC5Q8TCV5 224 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 ADAT3Q96EY9 351 aaPredicted RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 CMSS1Q9BQ75 279 aaKnown RBP0.53□□□□□ -2.32
CALD1-219ENST00000480638 C9orf16Q9BUW7 83 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 COMMD5Q9GZQ3 224 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 ARMC1Q9NVT9 282 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 KLK9Q9UKQ9 250 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 LRP2P98164 4655 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 DISP2A7MBM2 1401 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 MIA2Q96PC5 1412 aa0.53□□□□□ -2.32
CALD1-219ENST00000480638 TTC37Q6PGP7 1564 aa0.53□□□□□ -2.33
CALD1-219ENST00000480638 VIRMAQ69YN4 1812 aaKnown RBP0.52□□□□□ -2.33
CALD1-219ENST00000480638 EML6Q6ZMW3 1958 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 TRAV4A0A0B4J268 109 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 TMEM238C9JI98 176 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 PIRO00625 290 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 C8GP07360 202 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 RBP1P09455 135 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 G0S2P27469 103 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 ATP5G3P48201 142 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 ARF6P62330 175 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 LINC01554Q52M75 96 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 AKIRIN2Q53H80 203 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 SPANXN3Q5MJ09 141 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 Q6Q795 121 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 LCA10Q71F78 164 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 MIR17HGQ75NE6 70 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 EXOC3-AS1Q8N2X6 119 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 PXT1Q8NFP0 134 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 OR11H6Q8NGC7 330 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 MCFD2Q8NI22 146 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 STAG3L4Q8TBR4 150 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 DNAJC9Q8WXX5 260 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 SCGB3A1Q96QR1 104 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 KIFC1Q9BW19 673 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 CCDC90BQ9GZT6 254 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 TMEM133Q9H2Q1 129 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 NMNAT1Q9HAN9 279 aaPredicted RBP0.52□□□□□ -2.33
CALD1-219ENST00000480638 PARVBQ9HBI1 364 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 ENY2Q9NPA8 101 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 OPTCQ9UBM4 332 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 CKLFQ9UBR5 152 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 ERGIC3Q9Y282 383 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 ARL2BPQ9Y2Y0 163 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 FAM32AQ9Y421 112 aaKnown RBP0.52□□□□□ -2.33
CALD1-219ENST00000480638 ARL5AQ9Y689 179 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 KIAA0586Q9BVV6 1533 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 RGPD1P0DJD0 1748 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 SPHKAPQ2M3C7 1700 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 CSMD3Q7Z407 3707 aa0.52□□□□□ -2.33
CALD1-219ENST00000480638 C1orf196B1AJZ1 125 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 OR2T1O43869 369 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 OR2B3O76000 313 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 IFNA10P01566 189 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 APOBP04114 4563 aaKnown RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 SPI1P17947 270 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 PPIBP23284 216 aaKnown RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 RNASE4P34096 147 aaKnown RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 GNG10P50151 68 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 HSPE1P61604 102 aaKnown RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 SHPRHQ149N8 1683 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 TMED2Q15363 201 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 SPA17Q15506 151 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 ZC3H13Q5T200 1668 aaKnown RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 GOLT1AQ6ZVE7 132 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 KCPQ6ZWJ8 1503 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 DEFB128Q7Z7B8 93 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 LYG2Q86SG7 212 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 CASZ1Q86V15 1759 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 PHF13Q86YI8 300 aaPredicted RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 KRT222Q8N1A0 295 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 LINC00311Q8N616 119 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 SIGLECL1Q8N7X8 197 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 C3orf56Q8N813 242 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 Q8N814 137 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 OR5A1Q8NGJ0 315 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 AHCTF1Q8WYP5 2266 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 AP3S1Q92572 193 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 CEP19Q96LK0 163 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 PHB2Q99623 299 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 HOPXQ9BPY8 73 aaPredicted RBP0.51□□□□□ -2.33
CALD1-219ENST00000480638 GINS4Q9BRT9 223 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 SLC39A9Q9NUM3 307 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 MED29Q9NX70 200 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 UGGT1Q9NYU2 1555 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 SS18L2Q9UHA2 77 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 FAT2Q9NYQ8 4349 aa0.51□□□□□ -2.33
CALD1-219ENST00000480638 STARD9Q9P2P6 4700 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 PKD1P98161 4303 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 NUP188Q5SRE5 1749 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 RREB1Q92766 1687 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms