RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 Q0VFX4 171 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 A0A087X0K7 114 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 H3BUX3 64 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
MCF2L-225ENST00000480321 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 KLHDC3Q9BQ90 382 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 POLEQ07864 2286 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 MMP23AO75900 390 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 LIME1Q9H400 295 aa11.08□□□□□ -0.64
MCF2L-225ENST00000480321 ALPK2Q86TB3 2170 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 RPL35AP18077 110 aaKnown RBP11.07□□□□□ -0.64
MCF2L-225ENST00000480321 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-225ENST00000480321 TMEM249Q2WGJ8 235 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 CHAC1Q9BUX1 264 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
MCF2L-225ENST00000480321 NDUFB8O95169 186 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 FREM3P0C091 2139 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 YPEL3P61236 119 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-225ENST00000480321 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
MCF2L-225ENST00000480321 C1orf122Q6ZSJ8 110 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 GATD1Q8NB37 220 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
MCF2L-225ENST00000480321 SPANXDQ9BXN6 97 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
MCF2L-225ENST00000480321 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 C9JQL5 133 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 FXYD7P58549 80 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 NEGR1Q7Z3B1 354 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 C2orf82Q6UX34 121 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 BMPERQ8N8U9 685 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-225ENST00000480321 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 C18orf32Q8TCD1 76 aa11.05□□□□□ -0.64
MCF2L-225ENST00000480321 SDK2Q58EX2 2172 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
MCF2L-225ENST00000480321 C1orf147Q96MC9 270 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-225ENST00000480321 CNOT1A5YKK6 2376 aaKnown RBP11.04□□□□□ -0.64
MCF2L-225ENST00000480321 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-225ENST00000480321 IGHV3-53P01767 116 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 Q8TCH9 128 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 INSP01308 110 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 IGHV2-5P01817 119 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
MCF2L-225ENST00000480321 F8WEM9 126 aa11.04□□□□□ -0.64
MCF2L-225ENST00000480321 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-225ENST00000480321 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 PAX9P55771 341 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-225ENST00000480321 ZNF581Q9P0T4 197 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 SBF1O95248 1867 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
MCF2L-225ENST00000480321 GATA4P43694 442 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 AMN1Q8IY45 258 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 EREGO14944 169 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
MCF2L-225ENST00000480321 NDUFA4L2Q9NRX3 87 aa11.02□□□□□ -0.64
MCF2L-225ENST00000480321 CACNA1DQ01668 2161 aa11.02□□□□□ -0.64
MCF2L-225ENST00000480321 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 LY6G5BQ8NDX9 201 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 NDPQ00604 133 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 LEPROTO15243 131 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 TRPM7Q96QT4 1865 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 SLC25A16P16260 332 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 ARTNQ5T4W7 220 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 TRPT1Q86TN4 253 aaKnown RBP11.02□□□□□ -0.65
MCF2L-225ENST00000480321 Q8N8P6 123 aa11.02□□□□□ -0.65
MCF2L-225ENST00000480321 PAX4O43316 350 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 TIMM21Q9BVV7 248 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 CACNA1BQ00975 2339 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 ADAMTSL5Q6ZMM2 481 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 ZNF833PQ6ZTB9 187 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 LINC01356Q8N9X3 169 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 Q8TAT8 98 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 Q6ZS92 163 aa11.01□□□□□ -0.65
MCF2L-225ENST00000480321 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms