RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 MRPL32Q9BYC8 188 aaKnown RBP4.85□□□□□ -1.63
HERC4-210ENST00000480158 OR51M1Q9H341 326 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 SMAD5-AS1Q9Y6J3 95 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 U3KQE9 123 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 STAG3L2P0CL84 134 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 STAG3L3P0CL85 134 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 RAB5CP51148 216 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 TAS2R45P59539 299 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 UBE2L3P68036 154 aaKnown RBP4.85□□□□□ -1.63
HERC4-210ENST00000480158 GUCA2BQ16661 112 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 KHDC3LQ587J8 217 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 RBPMS2Q6ZRY4 209 aaKnown RBP4.85□□□□□ -1.63
HERC4-210ENST00000480158 S100A7AQ86SG5 101 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 TMEM61Q8N0U2 210 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
HERC4-210ENST00000480158 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.63
HERC4-210ENST00000480158 GP9P14770 177 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 RPL7P18124 248 aaKnown RBP4.84□□□□□ -1.63
HERC4-210ENST00000480158 GALR1P47211 349 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 RAB14P61106 215 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 RANP62826 216 aaKnown RBP4.84□□□□□ -1.63
HERC4-210ENST00000480158 DEFB114Q30KQ6 69 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 LRRC20Q8TCA0 184 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 ZNF586Q9NXT0 402 aa4.84□□□□□ -1.63
HERC4-210ENST00000480158 PRSS47A8MTI9 375 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 SLC17A3O00476 420 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 CXorf1O96002 111 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 NMBP08949 121 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 NBEAP1P0C6P0 100 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 HLA-DMBP28068 263 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 GCHFRP30047 84 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 S100A7P31151 101 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 C1orf194Q5T5A4 169 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 DPPA3Q6W0C5 159 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 EXOC3-AS1Q8N2X6 119 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 RNF182Q8N6D2 247 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 MARC2Q969Z3 335 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 FXYD5Q96DB9 178 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 MS4A6AQ9H2W1 248 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 TMEM231Q9H6L2 316 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 GNG13Q9P2W3 67 aa4.84□□□□□ -1.64
HERC4-210ENST00000480158 IGLC2P0DOY2 106 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 BMI1P35226 326 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 NDUFA5Q16718 116 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 HAGHQ16775 308 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 PQLC2Q6ZP29 291 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 ZNF767PQ75MW2 155 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 LINC00052Q96N35 136 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 PRELID1Q9Y255 219 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 HELTA6NFD8 242 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 MRPS12O15235 138 aaKnown RBP4.83□□□□□ -1.64
HERC4-210ENST00000480158 DEFB1P60022 68 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 CST9LP1Q5W188 147 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 WFDC9Q8NEX5 89 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 MBD3L1Q8WWY6 194 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 NRN1Q9NPD7 142 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 RPH3ALQ9UNE2 315 aa4.83□□□□□ -1.64
HERC4-210ENST00000480158 TRBV19A0A075B6N1 114 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
HERC4-210ENST00000480158 PAGE4O60829 102 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 NDUFB4O95168 129 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 IGLV1-51P01701 117 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 ZNF688P0C7X2 276 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 HIST1H1EP10412 219 aaKnown RBP4.82□□□□□ -1.64
HERC4-210ENST00000480158 C9orf66Q5T8R8 295 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 SLC7A5P1Q8MH63 180 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 SAT2Q96F10 170 aaPredicted RBP4.82□□□□□ -1.64
HERC4-210ENST00000480158 RARRES2Q99969 163 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 TMEM14CQ9P0S9 112 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 YTHDF2Q9Y5A9 579 aaKnown RBP4.82□□□□□ -1.64
HERC4-210ENST00000480158 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 G3V4G9 280 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 M0R3E3 92 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 PAFAH1B2P68402 229 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 PMS2P11Q13670 270 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 ICAM4Q14773 271 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 ZNF124Q15973 351 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 PRR31Q5SQ13 230 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 CFAP161Q6P656 301 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 GPR82Q96P67 336 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 RNF24Q9Y225 148 aa4.82□□□□□ -1.64
HERC4-210ENST00000480158 ANK2Q01484 3957 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 PGPA6NDG6 321 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 LCE2BO14633 110 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 TSPAN4O14817 238 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 HBE1P02100 147 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 ZNF705DP0CH99 300 aaPredicted RBP4.81□□□□□ -1.64
HERC4-210ENST00000480158 ZNF705BP0CI00 300 aaPredicted RBP4.81□□□□□ -1.64
HERC4-210ENST00000480158 ATP5G3P48201 142 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 GNG5P63218 68 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 PSMG4Q5JS54 123 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
HERC4-210ENST00000480158 EIF5A2Q9GZV4 153 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms