RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GGTLC3B5MD39 225 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 K7EQG2 157 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 TSPAN4O14817 238 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 NBEAP1P0C6P0 100 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 CD33P20138 364 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 GALR1P47211 349 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 S100A7AQ86SG5 101 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 LRRC20Q8TCA0 184 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 BLNKQ8WV28 456 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
CHD3-210ENST00000479080 HELTA6NFD8 242 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
CHD3-210ENST00000479080 UBE2G2P60604 165 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 IQCF2Q8IXL9 164 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 STXBP6Q8NFX7 210 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
CHD3-210ENST00000479080 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
CHD3-210ENST00000479080 ZNF256Q9Y2P7 627 aaPredicted RBP9.8□□□□□ -0.84
CHD3-210ENST00000479080 PAGE4O60829 102 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 ZNF253O75346 499 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 HBE1P02100 147 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 S100A7P31151 101 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 BMI1P35226 326 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 ATP5G3P48201 142 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 TFPI2P48307 235 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 DEFB1P60022 68 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 WFDC3Q8IUB2 231 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 EXOC3-AS1Q8N2X6 119 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 TMEM167BQ9NRX6 74 aa9.79□□□□□ -0.84
CHD3-210ENST00000479080 TRAV25A0A0B4J276 109 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 M0R3E3 92 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 PSMB3P49720 205 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 SRSF3P84103 164 aaKnown RBP9.78□□□□□ -0.84
CHD3-210ENST00000479080 PDE6HQ13956 83 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 BEAN1Q3B7T3 259 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 CCDC28AQ8IWP9 274 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 OR2K2Q8NGT1 345 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 RARRES2Q99969 163 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 Q9H3A6 140 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 RNF24Q9Y225 148 aa9.78□□□□□ -0.84
CHD3-210ENST00000479080 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 A0A1W2PRE2 83 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 C9JQL5 133 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 PRAC2D3DTV9 90 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 BCL2P10415 239 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 INSL3P51460 131 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 RANP62826 216 aaKnown RBP9.77□□□□□ -0.85
CHD3-210ENST00000479080 RPL11P62913 178 aaKnown RBP9.77□□□□□ -0.85
CHD3-210ENST00000479080 ICAM4Q14773 271 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 GUK1Q16774 197 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 HAGHQ16775 308 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 FAM210AQ96ND0 272 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 SPAG8Q99932 426 aaPredicted RBP9.77□□□□□ -0.85
CHD3-210ENST00000479080 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
CHD3-210ENST00000479080 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 ZNF705FA8MVS1 300 aaPredicted RBP9.76□□□□□ -0.85
CHD3-210ENST00000479080 G3V4G9 280 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 CD81P60033 236 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 KRTAP10-11P60412 298 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 GNG5P63218 68 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 ZNF124Q15973 351 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
CHD3-210ENST00000479080 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
CHD3-210ENST00000479080 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 ARL2-SNX15V9GYD0 113 aa9.76□□□□□ -0.85
CHD3-210ENST00000479080 LINC00862A6NCI5 91 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 ISLRO14498 428 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 CD5P06127 495 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 CD7P09564 240 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 MEOX2P50222 304 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 RAB14P61106 215 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 LCN12Q6JVE5 192 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
CHD3-210ENST00000479080 PGPA6NDG6 321 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 F6UB75 175 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 SUMO1P63165 101 aaKnown RBP9.74□□□□□ -0.85
CHD3-210ENST00000479080 EGFEM1PQ0D2K5 195 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 PSG3Q16557 428 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 GUCA2BQ16661 112 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 LYPD1Q8N2G4 141 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 WFDC10AQ9H1F0 79 aa9.74□□□□□ -0.85
CHD3-210ENST00000479080 MED9Q9NWA0 146 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms