RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 GTF3C1Q12789 2109 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CADP27708 2225 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MTORP42345 2549 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRUNE2Q8WUY3 3088 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MUC22E2RYF6 1773 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGKV2D-24A0A075B6R9 120 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGKV1D-17A0A075B6S4 117 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV3OR16-8A0A075B7F1 116 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TRBV6-7A0A0A0MS04 114 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV3-49A0A0A0MS15 119 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV3-74A0A0B4J1X5 117 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV3-66A0A0C4DH42 116 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TEX50A0A1B0GTY4 177 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 DUXBA0A1W2PPF3 345 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGSF23A1L1A6 192 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 C7orf66A4D0T2 115 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MAP1LC3B2A6NCE7 125 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CEACAM18A8MTB9 384 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HMSDA8MTL9 139 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF727A8MUV8 499 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF705FA8MVS1 300 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 H3BQ15 152 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 H7BYZ3 331 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NPFFO15130 113 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SLC31A2O15432 143 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF207O43670 478 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SPINK4O60575 86 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 YPEL1O60688 119 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PITX3O75364 302 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 EIF3GO75821 320 aaKnown RBP eCLIP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MMP23AO75900 390 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OR2A4O95047 310 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CDS2O95674 445 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CXorf1O96002 111 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HPRT1P00492 218 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MOSP00540 346 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CFDP00746 253 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGKV1D-33P01593 117 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGKV1-33P01594 117 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CD8AP01732 235 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHV3-23P01764 117 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 IGHG4P01861 327 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ORM1P02763 201 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TRGV3P03979 118 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FBP1P09467 338 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF705DP0CH99 300 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF705BP0CI00 300 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RD3LP0DJH9 198 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRB4P10163 310 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CTRB1P17538 263 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HLA-GP17693 338 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RAB4AP20338 218 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZP3P21754 424 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 USF1P22415 310 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NPPCP23582 126 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PAX6P26367 422 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ATP6V0CP27449 155 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 OTX1P32242 354 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BTCP35070 178 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 BMI1P35226 326 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CD200P41217 278 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RPL35P42766 123 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CDKN1BP46527 198 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RPS10P46783 165 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CDC34P49427 236 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 GNG4P50150 75 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF137PP52743 207 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 DLX1P56177 255 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NDUFA6P56556 154 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LINC00315P59091 139 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TPPP2P59282 170 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RAB5BP61020 215 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HSPE1P61604 102 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 NUTF2P61970 127 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RANP62826 216 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 UBE2L3P68036 154 aaKnown RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 QRFPP83859 136 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 RUNX1Q01196 453 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FLI1Q01543 452 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF90Q03938 601 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 REG3AQ06141 175 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 TFF3Q07654 80 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FABP9Q0Z7S8 132 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PSG5Q15238 335 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 HMGN3Q15651 99 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 PRR4Q16378 134 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 GUCA2BQ16661 112 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 GUK1Q16774 197 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MORN2Q502X0 79 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 KHDC3LQ587J8 217 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 SPRNQ5BIV9 151 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 LY6G6FQ5SQ64 297 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 FAM78BQ5VT40 261 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 C10orf113Q5VZT2 155 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 MIC13Q5XKP0 118 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 ZNF660Q6AZW8 331 aaPredicted RBP0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CYB5R2Q6BCY4 276 aa0.89□□□□□ -2.27
SRRM1-211ENST00000478890 CTRB2Q6GPI1 263 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms