RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ZNF137PP52743 207 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TCL1AP56279 114 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 MRGPRG-AS1Q2M3A8 158 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 ATP1A1-AS1Q5TC04 95 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 Q6AWC8 147 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 RNASEKQ6P5S7 137 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 IGFL3Q6UXB1 125 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 LINC00305Q7Z4B0 112 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 ZCCHC24Q8N2G6 241 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 C11orf42Q8N5U0 333 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF738Q8NE65 137 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 NUP35Q8NFH5 326 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 OR8B3Q8NGG8 313 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 OR9G1Q8NH87 305 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 LEAP2Q969E1 77 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 SNRNP40Q96DI7 357 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 FAM167A-AS1Q96KT0 104 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 GUCD1Q96NT3 240 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 GPR82Q96P67 336 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 OR8B2Q96RD0 313 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 CCL13Q99616 98 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PMCHL2Q9BQD1 86 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM70Q9BUB7 260 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 MRPL20Q9BYC9 149 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 RPP21Q9H633 154 aaKnown RBP3.38□□□□□ -1.87
GPNMB-210ENST00000478451 ST20Q9HBF5 79 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TNFRSF19Q9NS68 423 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 HSPB8Q9UJY1 196 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 EPDR1Q9UM22 224 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 KLF12Q9Y4X4 402 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 PPIAL4AQ9Y536 164 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 TRIOBPQ9H2D6 2365 aa3.38□□□□□ -1.87
GPNMB-210ENST00000478451 USP34Q70CQ2 3546 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 IGKV1OR2-108A0A075B7D4 117 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV1-69-2A0A0G2JMI3 117 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 SERTM2A0A1B0GWG4 89 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1B0GXF2 115 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 HIGD1CA8MV81 97 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 RBP4P02753 201 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 IGKV1-16P04430 117 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 SFTPCP11686 197 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 TSPOP30536 169 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 CEACAM8P31997 349 aaPredicted RBP3.37□□□□□ -1.87
GPNMB-210ENST00000478451 RPL27AP46776 148 aaKnown RBP3.37□□□□□ -1.87
GPNMB-210ENST00000478451 PLP1P60201 277 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 RPS20P60866 119 aaKnown RBP3.37□□□□□ -1.87
GPNMB-210ENST00000478451 SLC35B1P78383 322 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 RIGQ13278 110 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 PLGLAQ15195 96 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 MMDQ15546 238 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 DEFB109BQ30KR1 87 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 KIAA1644Q3SXP7 199 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 PSMG4Q5JS54 123 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 C12orf54Q6X4T0 127 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 NIT1Q86X76 327 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 LYPD1Q8N2G4 141 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 FAM216BQ8N7L0 139 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 OR10W1Q8NGF6 305 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 C8orf46Q8TAG6 207 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 FAM57AQ8TBR7 257 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
GPNMB-210ENST00000478451 FXYD5Q96DB9 178 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 ATP6V0BQ99437 205 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 RNF5Q99942 180 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 ALKBH7Q9BT30 221 aaPredicted RBP3.37□□□□□ -1.87
GPNMB-210ENST00000478451 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 MS4A6AQ9H2W1 248 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 OTORQ9NRC9 128 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 DCAF16Q9NXF7 216 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM14CQ9P0S9 112 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 KAAG1Q9UBP8 84 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 HIGD1AQ9Y241 93 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 AHCTF1Q8WYP5 2266 aa3.37□□□□□ -1.87
GPNMB-210ENST00000478451 TRAV30A0A087WSZ9 112 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV2-26A0A0B4J1V2 119 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 PGPA6NDG6 321 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 SRRM4A7MD48 611 aaKnown RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 F2Z2F3 143 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 CRXO43186 299 aaPredicted RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ENSAO43768 121 aaKnown RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 LEPROTL1O95214 131 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 LTAP01374 205 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 CRYGCP07315 174 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 PYYP10082 97 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ORM2P19652 201 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 MYCNOSP40205 109 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 CSN1S1P47710 185 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 WT1-ASQ06250 92 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF415Q09FC8 603 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 SLAQ13239 276 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 TNXAQ16473 311 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 LEMD1Q68G75 181 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms