RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MBD3L4A6NDZ8 208 aaPredicted RBP10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 MBD3L5A6NJ08 208 aaPredicted RBP10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 C15orf62A8K5M9 175 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 WISP2O76076 250 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 IGKV1D-12P01611 117 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 EMP1P54849 157 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 CT83Q5H943 113 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 FGFRL1Q8N441 504 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 AKAP13Q12802 2813 aa10.15□□□□□ -0.79
RTFDC1-207ENST00000477573 TRAV24A0A0B4J272 114 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 ZNHIT1O43257 154 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 OR1L4Q8NGR5 311 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 C21orf62Q9NYP8 219 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 CFAP47Q6ZTR5 3102 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 SVILO95425 2214 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 IGKV1-6A0A0C4DH72 117 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 A8MWV9 139 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 LINC01619G3V211 115 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 CRLF1O75462 422 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 NDUFA7O95182 113 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 ORM1P02763 201 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 P0C879 139 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 ABHD12Q8N2K0 398 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 ZNF414Q96IQ9 312 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 DKK4Q9UBT3 224 aa10.14□□□□□ -0.79
RTFDC1-207ENST00000477573 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 CHEK1O14757 476 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 CACNG7P62955 275 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 HES1Q14469 280 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 MOB3BQ86TA1 216 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 CIARTQ8N365 385 aaPredicted RBP10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 RITA1Q96K30 269 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 SCNM1Q9BWG6 230 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 GFRA4Q9GZZ7 299 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 MSRB2Q9Y3D2 182 aa10.13□□□□□ -0.79
RTFDC1-207ENST00000477573 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 ZG16O60844 167 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 OR2H2O95918 312 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 APOHP02749 345 aaPredicted RBP10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 FGF12P61328 243 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 FOXF2Q12947 444 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 OR8A1Q8NGG7 326 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 MGST2Q99735 147 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 SSUH2Q9Y2M2 353 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 FRYQ5TBA9 3013 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 LTAP01374 205 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 IGKV3-15P01624 115 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 IL4P05112 153 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 MIC13Q5XKP0 118 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 LINC00596Q86U02 117 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 RTL8AQ9BWD3 113 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 INTS1Q8N201 2190 aaKnown RBP10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 ACACAQ13085 2346 aa10.12□□□□□ -0.79
RTFDC1-207ENST00000477573 APC2O95996 2303 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 TRBV6-6A0A0A6YYG2 114 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 C8orf88P0DMB2 117 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 SPINK2P20155 84 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 CXorf67Q86X51 503 aaPredicted RBP10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 DUX3Q96PT4 197 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 M0R2P5 195 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 GFRA3O60609 400 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 CA6P23280 308 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 ZNF138P52744 262 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
RTFDC1-207ENST00000477573 ANKRD11Q6UB99 2663 aaPredicted RBP10.1□□□□□ -0.79
RTFDC1-207ENST00000477573 SLC25A2Q9BXI2 301 aa10.1□□□□□ -0.79
RTFDC1-207ENST00000477573 FGF23Q9GZV9 251 aaPredicted RBP10.1□□□□□ -0.79
RTFDC1-207ENST00000477573 MAP1BP46821 2468 aaKnown RBP10.1□□□□□ -0.79
RTFDC1-207ENST00000477573 IQCF6A8MYZ5 107 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 J3QT63 122 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 K7EM74 188 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 IGLV2-14P01704 120 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 EDDM3AQ14507 147 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 KLF17Q5JT82 389 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 SEM1Q6ZVN7 128 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 Q8IYB0 196 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 ASCL2Q99929 193 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 PLEKHA3Q9HB20 300 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 LSM4Q9Y4Z0 139 aaKnown RBP10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 UBE2D3P61077 147 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 UBE2D2P62837 147 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 PRSS3P2Q8NHM4 247 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 FAM57AQ8TBR7 257 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 FZR1Q9UM11 496 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 CEP295Q9C0D2 2601 aa10.09□□□□□ -0.79
RTFDC1-207ENST00000477573 K7ENP7 123 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 HOXA3O43365 443 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 IGLV1-44P01699 117 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms