RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 ATP5J2P56134 94 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 TPPP2P59282 170 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 GDF5OSQ5U4N7 250 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 HIST2H2BCQ6DN03 193 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 Q71RC1 249 aaPredicted RBP8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 MS4A10Q96PG2 267 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 PRO1933Q9H354 126 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 A8MWL6 223 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 K7EQM0 130 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 SRIP30626 198 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 PAFAH1B2P68402 229 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 RHOGP84095 191 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 SLAQ13239 276 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 C15orf32Q32M92 178 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 CT83Q5H943 113 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 CLEC2AQ6UVW9 174 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 TMEM219Q86XT9 240 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 C5orf56Q8N8D9 126 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 ZNF502Q8TBZ5 544 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
HLA-DMB-260ENST00000477537 APCP25054 2843 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV3-35A0A0C4DH35 117 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 VWC2LB2RUY7 222 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 DIRC3C9JPN6 131 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 G3V318 75 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 GPR183P32249 361 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 PKIAP61925 76 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 OR10J3Q5JRS4 329 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 BRD3OSQ6XYD6 125 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 ASCL2Q99929 193 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 PSG8Q9UQ74 426 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 SVEP1Q4LDE5 3571 aa8.59□□□□□ -1.03
HLA-DMB-260ENST00000477537 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 TRAV20A0A0B4J274 112 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 M0R3E3 92 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 NDUFS8O00217 210 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 SCGB1D1O95968 90 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 CAMPP49913 170 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 PDE6HQ13956 83 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 PGLYRP4Q96LB8 373 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 NOL4LQ96MY1 436 aaPredicted RBP8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 MOB4Q9Y3A3 225 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 ITPR2Q14571 2701 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGHV4-30-2A0A087WSY4 118 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 A0A1B0GXF2 115 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF253O75346 499 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 CLEC3BP05452 202 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 RPL7P18124 248 aaKnown RBP8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 PSG3Q16557 428 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 KLK9Q2XQG4 91 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZFP30Q9Y2G7 519 aa8.58□□□□□ -1.04
HLA-DMB-260ENST00000477537 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 CSN1S1P47710 185 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 PSG9Q00887 426 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 Q6ZWC4 215 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 OR4B1Q8NGF8 309 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 RCHY1Q96PM5 261 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF785A8K8V0 405 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGHV4-38-2P0DP08 117 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 S100A7P31151 101 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 HBBP68871 147 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 TOMM20LQ6UXN7 152 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 RBPMS2Q6ZRY4 209 aaKnown RBP8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF664Q8N3J9 261 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 PIFOQ8TCI5 191 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 CCDC140Q96MF4 163 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 NAGKQ9UJ70 344 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 SOX21Q9Y651 276 aaPredicted RBP8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 UNC79Q9P2D8 2635 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 ANKRD17O75179 2603 aaKnown RBP8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 CD33P20138 364 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 PRR31Q5SQ13 230 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 SIGLECL1Q8N7X8 197 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 EEF1AKMT3Q96AZ1 226 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
HLA-DMB-260ENST00000477537 A0A1W2PS18 150 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms