RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FAM25CB3EWG5 89 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 FAM25GB3EWG6 89 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 H3BRN7 92 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 S100A7P31151 101 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 PSG3Q16557 428 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 TMED4Q7Z7H5 227 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 RPUSD4Q96CM3 377 aaKnown RBP7.72□□□□□ -1.17
BRCA1-213ENST00000476777 C20orf144Q9BQM9 153 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 SHPKQ9UHJ6 478 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
BRCA1-213ENST00000476777 SNURFLB1AK76 121 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 PRSS46E5RG02 174 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
BRCA1-213ENST00000476777 NCS1P62166 190 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 RAB11AP62491 216 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.18
BRCA1-213ENST00000476777 GFI1BQ5VTD9 330 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 Q6ZTI0 123 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 OR1S1Q8NH92 325 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 SHANK2-AS3Q9BTD1 123 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 TMEM70Q9BUB7 260 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 PARD6GQ9BYG4 376 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-213ENST00000476777 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 EXTL2Q9UBQ6 330 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 PAIP2BQ9ULR5 123 aaKnown RBP7.71□□□□□ -1.18
BRCA1-213ENST00000476777 KCNIP3Q9Y2W7 256 aa7.71□□□□□ -1.18
BRCA1-213ENST00000476777 A0A087X0K7 114 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 DISC1C4P0D8 188 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 PITX3O75364 302 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 IAPPP10997 89 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 AKR1C4P17516 323 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 VBP1P61758 197 aa7.7□□□□□ -1.18
BRCA1-213ENST00000476777 SSBP1Q04837 148 aaKnown RBP7.69□□□□□ -1.18
BRCA1-213ENST00000476777 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
BRCA1-213ENST00000476777 MZT2AQ6P582 158 aa7.69□□□□□ -1.18
BRCA1-213ENST00000476777 C15orf40Q8WUR7 153 aa7.69□□□□□ -1.18
BRCA1-213ENST00000476777 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
BRCA1-213ENST00000476777 TRGV2A0A075B6R0 118 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 MRPS12O15235 138 aaKnown RBP7.68□□□□□ -1.18
BRCA1-213ENST00000476777 HYPMO75409 117 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 RAP2BP61225 183 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 AKR1C1Q04828 323 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 LYPD5Q6UWN5 251 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 OR51S1Q8NGJ8 323 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 LRRC20Q8TCA0 184 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 PRRT1Q99946 306 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
BRCA1-213ENST00000476777 TRAV9-2A0A087WT02 112 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 IGLV5-52A0A0A0MRZ9 124 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 ZNF324O75467 553 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-213ENST00000476777 PLP1P60201 277 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 CYP2G1PQ6ZSU1 146 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 ACOT7LQ6ZUV0 252 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 CCDC190Q86UF4 302 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 LINC00467Q9BRT7 94 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 FUNDC2Q9BWH2 189 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 LY96Q9Y6Y9 160 aa7.67□□□□□ -1.18
BRCA1-213ENST00000476777 TRAV12-3A0A0B4J271 114 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 PMS2P5A8MQ11 134 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 J3KRW8 73 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 PAX4O43316 350 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 IL5P05113 134 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 OR5G3P0C626 314 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 AKAIN1P0CW23 69 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 CXCL2P19875 107 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 RPP30P78346 268 aaKnown RBP7.66□□□□□ -1.18
BRCA1-213ENST00000476777 SRPXP78539 464 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 SYT8Q8NBV8 401 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 AP3S1Q92572 193 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 CIB3Q96Q77 187 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-213ENST00000476777 PYGO2Q9BRQ0 406 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-213ENST00000476777 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 FUT9Q9Y231 359 aa7.66□□□□□ -1.18
BRCA1-213ENST00000476777 TRGV1A0A0A0MS02 117 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 LINC00854A0A1B0GVQ3 168 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 K7EP13 123 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 MED6O75586 246 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 LINC00869P0C866 280 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 CT45A10P0DMU9 189 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 MRPS10P82664 201 aaKnown RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 LCN15Q6UWW0 184 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 PATE2Q6UY27 113 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 CLVS1Q8IUQ0 354 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 ZBTB8BQ8NAP8 495 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 ZNF431Q8TF32 576 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 NTN5Q8WTR8 489 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-213ENST00000476777 SMIM4Q8WVI0 70 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 VCX3AQ9NNX9 186 aa7.65□□□□□ -1.18
BRCA1-213ENST00000476777 DUXBA0A1W2PPF3 345 aa7.64□□□□□ -1.19
BRCA1-213ENST00000476777 LRCOL1A6NCL2 159 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms