RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RAP2BP61225 183 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 SELENOTP62341 195 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 DLK1P80370 383 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
MRPL55-228ENST00000476267 SMIM8Q96KF7 97 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 PSENENQ9NZ42 101 aa9.14□□□□□ -0.95
MRPL55-228ENST00000476267 SMCO3A2RU48 225 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 SSSCA1O60232 199 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 NUDT3O95989 172 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 PRB4P10163 310 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-228ENST00000476267 CXCL2P19875 107 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 KIR3DS1Q14943 382 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 LINC01587Q99440 93 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
MRPL55-228ENST00000476267 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-228ENST00000476267 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 NOL3O60936 208 aaKnown RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 NDUFB6O95139 128 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 OR5G3P0C626 314 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 CDKN1BP46527 198 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 CCL18P55774 89 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 RRAS2P62070 204 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 ZBTB8BQ8NAP8 495 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 SRRQ9GZT4 340 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 ARL6Q9H0F7 186 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 NPVFQ9HCQ7 196 aa9.12□□□□□ -0.95
MRPL55-228ENST00000476267 TIMM8BQ9Y5J9 83 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-228ENST00000476267 RHOBP62745 196 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 SLC38A11Q08AI6 406 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 ARL16Q0P5N6 197 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 C4orf46Q504U0 113 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 TEPPQ6URK8 271 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 LCN15Q6UWW0 184 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 FLVCR2Q9UPI3 526 aa9.11□□□□□ -0.95
MRPL55-228ENST00000476267 RCL1Q9Y2P8 373 aaKnown RBP9.11□□□□□ -0.95
MRPL55-228ENST00000476267 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 H7BYZ3 331 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 SLC17A3O00476 420 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 OR4E1P0C645 316 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 METTL15P1P0C7V9 234 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 HOXA5P20719 270 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 BTCP35070 178 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 BAK1Q16611 211 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 PXDC1Q5TGL8 231 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 TMEM37Q8WXS4 190 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 ZNF503Q96F45 646 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
MRPL55-228ENST00000476267 PARD6GQ9BYG4 376 aaPredicted RBP9.1□□□□□ -0.95
MRPL55-228ENST00000476267 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
MRPL55-228ENST00000476267 AGPAT2O15120 278 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 TSC22D2O75157 780 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 IGLC2P0DOY2 106 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 HTN1P15515 57 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 TAS2R30P59541 319 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 GFI1BQ5VTD9 330 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 ZNF546Q86UE3 836 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 MAPKAPK5-AS1Q8N8E1 139 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 OR10P1Q8NGE3 313 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
MRPL55-228ENST00000476267 UPK3BQ9BT76 320 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 RBM38Q9H0Z9 239 aaKnown RBP9.09□□□□□ -0.95
MRPL55-228ENST00000476267 Q9H8V8 135 aa9.09□□□□□ -0.95
MRPL55-228ENST00000476267 TRAV26-1A0A087WT03 109 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 NAP1L6A6NFF2 107 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 ZNF701M0R085 212 aaPredicted RBP9.08□□□□□ -0.96
MRPL55-228ENST00000476267 SNRPCP09234 159 aaKnown RBP9.08□□□□□ -0.96
MRPL55-228ENST00000476267 S100A5P33763 92 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 S100A7AQ86SG5 101 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 LRRC20Q8TCA0 184 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 RXFP4Q8TDU9 374 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 SDHCQ99643 169 aaPredicted RBP9.08□□□□□ -0.96
MRPL55-228ENST00000476267 MGST2Q99735 147 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 GGACTQ9BVM4 153 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 Q9H3A6 140 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 PPP1R14DQ9NXH3 145 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 RNF24Q9Y225 148 aa9.08□□□□□ -0.96
MRPL55-228ENST00000476267 LINC00854A0A1B0GVQ3 168 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 C7orf66A4D0T2 115 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 H3BNG1 76 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 H3BQ15 152 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 ANXA7P20073 488 aaKnown RBP9.07□□□□□ -0.96
MRPL55-228ENST00000476267 M6PRP20645 277 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 OPCMLQ14982 345 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 IAH1Q2TAA2 248 aaPredicted RBP9.07□□□□□ -0.96
MRPL55-228ENST00000476267 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 OR10J6PQ8NGY7 276 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 GNPNAT1Q96EK6 184 aaPredicted RBP9.07□□□□□ -0.96
MRPL55-228ENST00000476267 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
MRPL55-228ENST00000476267 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
MRPL55-228ENST00000476267 H3BTX0 84 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms