RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 UBE2G1P62253 170 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 TMEM136Q6ZRR5 245 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 S4R3C0 116 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 ZNF562Q6V9R5 426 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 Q9H3A6 140 aa12.6□□□□□ -0.39
VARS2-207ENST00000476162 NUDT3O95989 172 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 NTF3P20783 257 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 NDPQ00604 133 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 FER1L6-AS1Q8NA97 138 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
VARS2-207ENST00000476162 OOSP1A8MZH6 123 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 SRIP30626 198 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.39
VARS2-207ENST00000476162 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 Q8N6K4 173 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 ARPC1AQ92747 370 aa12.58□□□□□ -0.39
VARS2-207ENST00000476162 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 BMPR1BO00238 502 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 BPESC1Q9GZL8 116 aa12.58□□□□□ -0.4
VARS2-207ENST00000476162 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 CD5LO43866 347 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 EBI3Q14213 229 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 Q56UQ5 140 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 EBLN2Q6P2I7 272 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 MBD6Q96DN6 1003 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 GPR82Q96P67 336 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 TMEM14CQ9P0S9 112 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 TP73-AS1Q9UF72 201 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 NPIPB5A8MRT5 1133 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 TCRAP04437 139 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
VARS2-207ENST00000476162 COX19Q49B96 90 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
VARS2-207ENST00000476162 IZUMO1RA6ND01 250 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 GNG7O60262 68 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 IL4P05112 153 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 LMO4P61968 165 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 TTC9CQ8N5M4 171 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 RNF125Q96EQ8 232 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 MLST8Q9BVC4 326 aa12.56□□□□□ -0.4
VARS2-207ENST00000476162 FAM181BA6NEQ2 426 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 AMY1AP04745 511 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 C12orf54Q6X4T0 127 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
VARS2-207ENST00000476162 C2orf70A6NJV1 201 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 H3BRN7 92 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 UBE2E1P51965 193 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 ST20Q9HBF5 79 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
VARS2-207ENST00000476162 LTAP01374 205 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 MFAP4P55083 255 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
VARS2-207ENST00000476162 SPATA12Q7Z6I5 190 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 BPIFA4PQ86YQ2 179 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
VARS2-207ENST00000476162 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 C18orf32Q8TCD1 76 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
VARS2-207ENST00000476162 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
VARS2-207ENST00000476162 TRAV8-1A0A0A6YYK1 113 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 IGHV7-81A0A0B4J1V7 117 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
VARS2-207ENST00000476162 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
VARS2-207ENST00000476162 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 UFSP1Q6NVU6 142 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 Q8N9W7 124 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 CHRDL1Q9BU40 450 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 SMPXQ9UHP9 88 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 OVOL3O00110 214 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 IGHV3-23P01764 117 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 FCGR2BP31994 310 aaPredicted RBP12.53□□□□□ -0.4
VARS2-207ENST00000476162 ZNF331Q9NQX6 463 aaPredicted RBP12.53□□□□□ -0.4
VARS2-207ENST00000476162 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
VARS2-207ENST00000476162 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
VARS2-207ENST00000476162 SAA4P35542 130 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms