RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	DAP	P51397	102 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	PSMD7	P51665	324 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CCR6	P51684	374 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	OR2B8P	P59922	312 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	NUTF2	P61970	127 aa	Known RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	SNRPG	P62308	76 aa	Known RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	PAFAH1B2	P68402	229 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	HLA-DRB3	P79483	266 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	GPR176	Q14439	515 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMEM183B	Q1AE95	376 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	LELP1	Q5T871	98 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	XAF1	Q6GPH4	301 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	C22orf42	Q6IC83	251 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMEM183A	Q8IXX5	376 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	CBR4	Q8N4T8	237 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	ATP6V1G3	Q96LB4	118 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMEM70	Q9BUB7	260 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	PRRG3	Q9BZD7	231 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	OR51E2	Q9H255	320 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	GOLT1B	Q9Y3E0	138 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	YTHDF2	Q9Y5A9	579 aa	Known RBP	2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	RFNG	Q9Y644	331 aa		2.71	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRAV8-7	A0A075B6U6	113 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRAV2	A0A0B4J234	112 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	PLAC8L1	A1L4L8	177 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	SMIM9	A6NGZ8	99 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	YIF1A	O95070	293 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	DCK	P27707	260 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	HTR2C	P28335	458 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	GNRHR	P30968	328 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	POLR2I	P36954	125 aa	Known RBP	2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	GTF2A1	P52655	376 aa	Predicted RBP	2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	DAD1	P61803	113 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	PPP3R1	P63098	170 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	CLINT1	Q14677	625 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	JAGN1	Q8N5M9	183 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	UBAC2	Q8NBM4	344 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMEM167A	Q8TBQ9	72 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	DCANP1	Q8TF63	244 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	DGCR14	Q96DF8	476 aa	Known RBP	2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	CMTM5	Q96DZ9	223 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	UPK3B	Q9BT76	320 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	VSIR	Q9H7M9	311 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	C21orf62	Q9NYP8	219 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	RABAC1	Q9UI14	185 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	AK3	Q9UIJ7	227 aa		2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	PUS1	Q9Y606	427 aa	Known RBP eCLIP	2.7	□□□□□ -1.98
PRKD3-208	ENST00000475912	IGKV2D-24	A0A075B6R9	120 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912		F5H768	121 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912		H3BMM0	161 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912		K7EIM0	57 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	WRB	O00258	174 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	GNGT2	O14610	69 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	SNAI2	O43623	268 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	PRM2	P04554	102 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	CD2	P06729	351 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	HLA-G	P17693	338 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	CEL	P19835	753 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	FXYD7	P58549	80 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	RPL30	P62888	115 aa	Known RBP	2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	WT1-AS	Q06250	92 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	TMED1	Q13445	227 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	TPBG	Q13641	420 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	ESRG	Q1W209	222 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912		Q56UQ5	140 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	OR10K2	Q6IF99	312 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	ZNF493	Q6ZR52	646 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912		Q6ZSA8	131 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	DHFR2	Q86XF0	187 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	DEFB107A	Q8IZN7	70 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	SYS1	Q8N2H4	156 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	GDPD1	Q8N9F7	314 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	DUSP18	Q8NEJ0	188 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	OR10W1	Q8NGF6	305 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	MARCH1	Q8TCQ1	289 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	DNAJC9	Q8WXX5	260 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	FAM3D	Q96BQ1	224 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	DCUN1D5	Q9BTE7	237 aa		2.69	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRBV6-7	A0A0A0MS04	114 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	TRAV3	A0A0B4J244	114 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	BET1	O15155	118 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	FAM107A	O95990	144 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	CD5	P06127	495 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	DEFB130B	P0DP73	79 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	DEFB130A	P0DP74	79 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	SRM	P19623	302 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	CRHBP	P24387	322 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	DEFB1	P60022	68 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	MXD1	Q05195	221 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	YIF1B	Q5BJH7	314 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	PSMG4	Q5JS54	123 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	OGFRL1	Q5TC84	451 aa	Predicted RBP	2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	GDF5OS	Q5U4N7	250 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	ZNF773	Q6PK81	442 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	TOMM20L	Q6UXN7	152 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	CMTM1	Q8IZ96	169 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	H1FOO	Q8IZA3	346 aa	Predicted RBP	2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	C1orf158	Q8N1D5	194 aa		2.68	□□□□□ -1.98
PRKD3-208	ENST00000475912	ACBD7	Q8N6N7	88 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms