RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 OR4S1Q8NGB4 309 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 C1orf54Q8WWF1 131 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 MAGOHBQ96A72 148 aaKnown RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 CXCL16Q9H2A7 254 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 COL4A2P08572 1712 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 PRRC2AP48634 2157 aaKnown RBP2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 CEP350Q5VT06 3117 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 COL1A2P08123 1366 aa2.61□□□□□ -1.99
SRGAP3-205ENST00000475560 PTPRGP23470 1445 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 MIFP14174 115 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 ROMO1P60602 79 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 MAXP61244 160 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 NCS1P62166 190 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 CDK5R1Q15078 307 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 TPRXLQ17RH7 258 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 ZNF181Q2M3W8 571 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 TMEM155Q4W5P6 130 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 RNASE10Q5GAN6 216 aaKnown RBP2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 CGREF1Q99674 301 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 LPAR5Q9H1C0 372 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 BANF2Q9H503 90 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 ERG28Q9UKR5 140 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 LY96Q9Y6Y9 160 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 EML6Q6ZMW3 1958 aa2.6□□□□□ -1.99
SRGAP3-205ENST00000475560 DISP2A7MBM2 1401 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 SCAPERQ9BY12 1400 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 ARHGAP32A7KAX9 2087 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 CACNA1DQ01668 2161 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 MEIKINA0A087WXM9 373 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 IGKV2D-26A0A0A0MRZ7 120 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 A0A1B0GV90 55 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 B4DSR2 109 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 PROSCO94903 275 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 IGLV1-51P01701 117 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 TSPAN19P0C672 248 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 KDELR1P24390 212 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 SSR2P43308 183 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 FOXA3P55318 350 aaPredicted RBP2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 HES1Q14469 280 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 C9orf163Q8N9P6 203 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 TNFSF18Q9UNG2 199 aa2.59□□□□□ -1.99
SRGAP3-205ENST00000475560 CCDC88CQ9P219 2028 aa2.59□□□□□ -2
SRGAP3-205ENST00000475560 SETBP1Q9Y6X0 1596 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 TOP2BQ02880 1626 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 C17orf112F2Z3M2 114 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 TPST1O60507 370 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 TCRAP04437 139 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 ASAH2BP0C7U1 165 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 FABP4P15090 132 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 RPS25P62851 125 aaKnown RBP2.58□□□□□ -2
SRGAP3-205ENST00000475560 QRFPP83859 136 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 HCP5Q6MZN7 132 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 Q8N814 137 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 OR4C6Q8NH72 309 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 RTEL1-TNFRSF6BF6WH68 1400 aa2.58□□□□□ -2
SRGAP3-205ENST00000475560 SYNJ1O43426 1573 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 OR2T8A6NH00 312 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 LINC00587B1AMM8 73 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 J3QR89 54 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 UQCRQO14949 82 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 LYRM1O43325 122 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 UBL3O95164 117 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 IGKV1-17P01599 117 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 SLC25A5P05141 298 aaKnown RBP2.57□□□□□ -2
SRGAP3-205ENST00000475560 MRPS36P82909 103 aaKnown RBP2.57□□□□□ -2
SRGAP3-205ENST00000475560 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 ZNF846Q147U1 533 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 CCL4L1Q8NHW4 92 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 SPACA4Q8TDM5 124 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 HEATR5AQ86XA9 2040 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 TNS3Q68CZ2 1445 aa2.57□□□□□ -2
SRGAP3-205ENST00000475560 COL1A1P02452 1464 aaPredicted RBP2.57□□□□□ -2
SRGAP3-205ENST00000475560 LTBP2Q14767 1821 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 IGKV1D-17A0A075B6S4 117 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 ZNF727A8MUV8 499 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 M0R233 179 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 CRPP02741 224 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 IGLC6P0CF74 106 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 TPT1P13693 172 aaKnown RBP2.56□□□□□ -2
SRGAP3-205ENST00000475560 ZNF93P35789 620 aaPredicted RBP2.56□□□□□ -2
SRGAP3-205ENST00000475560 RRAS2P62070 204 aaPredicted RBP2.56□□□□□ -2
SRGAP3-205ENST00000475560 HAGHLQ6PII5 290 aaPredicted RBP2.56□□□□□ -2
SRGAP3-205ENST00000475560 IGFL3Q6UXB1 125 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 CTAGE3PQ8IX95 158 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 MMGT1Q8N4V1 131 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 OR5D14Q8NGL3 314 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 OR2T35Q8NGX2 323 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 HYLS1Q96M11 299 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 TP53RKQ96S44 253 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 CST9LQ9H4G1 147 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 KDM6AO15550 1401 aaPredicted RBP2.56□□□□□ -2
SRGAP3-205ENST00000475560 UHRF1BP1LA0JNW5 1464 aa2.56□□□□□ -2
SRGAP3-205ENST00000475560 IGKV3D-11A0A0A0MRZ8 115 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 hDV103S1A0JD37 113 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 K7ERU9 68 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 DLEU1O43261 78 aa2.55□□□□□ -2
SRGAP3-205ENST00000475560 ZNF737O75373 536 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms