RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 CXCL3P19876 107 aa9.64□□□□□ -0.87
EPCAM-205ENST00000474691 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
EPCAM-205ENST00000474691 TOMM5Q8N4H5 51 aa9.64□□□□□ -0.87
EPCAM-205ENST00000474691 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
EPCAM-205ENST00000474691 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
EPCAM-205ENST00000474691 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 SELENOTP62341 195 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 SPCS2Q15005 226 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
EPCAM-205ENST00000474691 MCFD2Q8NI22 146 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 RXFP4Q8TDU9 374 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 C20orf144Q9BQM9 153 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
EPCAM-205ENST00000474691 GAGE12BA1L429 117 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 GAGE7O76087 117 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 ZNF503Q96F45 646 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 SLC50A1Q9BRV3 221 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 ARL6Q9H0F7 186 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 Q9H3A6 140 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 CCDC59Q9P031 241 aaKnown RBP9.62□□□□□ -0.87
EPCAM-205ENST00000474691 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
EPCAM-205ENST00000474691 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
EPCAM-205ENST00000474691 A0A087X0K7 114 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 J3KRW8 73 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 SFT2D2O95562 160 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
EPCAM-205ENST00000474691 RRAS2P62070 204 aaPredicted RBP9.61□□□□□ -0.87
EPCAM-205ENST00000474691 PYDC2Q56P42 97 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 LCN15Q6UWW0 184 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 LRTM2Q8N967 370 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 RNASE8Q8TDE3 154 aaKnown RBP9.61□□□□□ -0.87
EPCAM-205ENST00000474691 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 SLC25A21Q9BQT8 299 aaPredicted RBP9.61□□□□□ -0.87
EPCAM-205ENST00000474691 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
EPCAM-205ENST00000474691 ZNF586Q9NXT0 402 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
EPCAM-205ENST00000474691 PRSS46E5RG02 174 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 ZNF701M0R085 212 aaPredicted RBP9.6□□□□□ -0.87
EPCAM-205ENST00000474691 GOSR2O14653 212 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 CXCL2P19875 107 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 BPIFA4PQ86YQ2 179 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 OR10P1Q8NGE3 313 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 RAB2BQ8WUD1 216 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 ARV1Q9H2C2 271 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 NPVFQ9HCQ7 196 aa9.6□□□□□ -0.87
EPCAM-205ENST00000474691 TRGV2A0A075B6R0 118 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 PMS2P5A8MQ11 134 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 SSSCA1O60232 199 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 PRB4P10163 310 aaPredicted RBP9.59□□□□□ -0.87
EPCAM-205ENST00000474691 INPP1P49441 399 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 PLP1P60201 277 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 PPP1R1AQ13522 171 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 ESRGQ1W209 222 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 PXDC1Q5TGL8 231 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
EPCAM-205ENST00000474691 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
EPCAM-205ENST00000474691 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 H3BNG1 76 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 COX7A2P2O60397 106 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 SCGB1D2O95969 90 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 TNFSF8P32971 234 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 LEPP41159 167 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 POLR2GP62487 172 aaKnown RBP eCLIP9.58□□□□□ -0.88
EPCAM-205ENST00000474691 TEPPQ6URK8 271 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 LINC00305Q7Z4B0 112 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
EPCAM-205ENST00000474691 IFNA5P01569 189 aa9.57□□□□□ -0.88
EPCAM-205ENST00000474691 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
EPCAM-205ENST00000474691 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
EPCAM-205ENST00000474691 ZNF546Q86UE3 836 aa9.57□□□□□ -0.88
EPCAM-205ENST00000474691 ZBTB8BQ8NAP8 495 aaPredicted RBP9.57□□□□□ -0.88
EPCAM-205ENST00000474691 DYNC2LI1Q8TCX1 351 aa9.57□□□□□ -0.88
EPCAM-205ENST00000474691 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
EPCAM-205ENST00000474691 PXMP4Q9Y6I8 212 aa9.57□□□□□ -0.88
EPCAM-205ENST00000474691 TRAV12-3A0A0B4J271 114 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 SIVA1O15304 175 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 TMBIM6P55061 237 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 SLC38A11Q08AI6 406 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 GFI1BQ5VTD9 330 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 Q6ZRG5 221 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 DEDD2Q8WXF8 326 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 BCL7BQ9BQE9 202 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
EPCAM-205ENST00000474691 PKD1P98161 4303 aa9.56□□□□□ -0.88
EPCAM-205ENST00000474691 HOXA5P20719 270 aa9.55□□□□□ -0.88
EPCAM-205ENST00000474691 S100A5P33763 92 aa9.55□□□□□ -0.88
EPCAM-205ENST00000474691 LINC00315P59091 139 aa9.55□□□□□ -0.88
EPCAM-205ENST00000474691 ID3Q02535 119 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms