RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 NEGR1Q7Z3B1 354 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 MED12LQ86YW9 2145 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 TPRX1Q8N7U7 411 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 NEU4Q8WWR8 484 aaPredicted RBP6.45□□□□□ -1.38
CCDC93-208ENST00000474546 NPIPB3Q92617 1050 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 PGLYRP4Q96LB8 373 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 SPOCK3Q9BQ16 436 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 RAB1BQ9H0U4 201 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 MEGF9Q9H1U4 602 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 Q9H3A6 140 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
CCDC93-208ENST00000474546 CLEC5AQ9NY25 188 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 U3KQK5 164 aa6.45□□□□□ -1.38
CCDC93-208ENST00000474546 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
CCDC93-208ENST00000474546 VPS13CQ709C8 3753 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 TRAV17A0A0B4J275 112 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 hDV102S1A0JD36 115 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 SLC25A17O43808 307 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ATP5LO75964 103 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 CA1P00915 261 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-208ENST00000474546 APOHP02749 345 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-208ENST00000474546 FRMD6-AS1P0C7T7 363 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 GP9P14770 177 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 GPR6P46095 362 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-208ENST00000474546 RBPJQ06330 500 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 LINC00696Q6ZRV3 163 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 COX8CQ7Z4L0 72 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 MOGAT3Q86VF5 341 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 FAM168AQ92567 244 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ARPC1AQ92747 370 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF414Q96IQ9 312 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 AAMDCQ9H7C9 122 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF71Q9NQZ8 489 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-208ENST00000474546 METRNQ9UJH8 293 aa6.44□□□□□ -1.38
CCDC93-208ENST00000474546 PRRC2CQ9Y520 2896 aaKnown RBP6.44□□□□□ -1.38
CCDC93-208ENST00000474546 ANK2Q01484 3957 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 IGHV1-18A0A0C4DH31 117 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 LINC01619G3V211 115 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 FSTL3O95633 263 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 RBP4P02753 201 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 PYYP10082 97 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 RAB9AP51151 201 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 TNFAIP6P98066 277 aaPredicted RBP6.43□□□□□ -1.38
CCDC93-208ENST00000474546 MAJINQ3KP22 176 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 SAMD13Q5VXD3 122 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 LCNL1Q6ZST4 164 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 CNEP1R1Q8N9A8 125 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 ZNRF1Q8ND25 227 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 NUP37Q8NFH4 326 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 OR1B1Q8NGR6 318 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 GTSF1Q8WW33 167 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 DEFB127Q9H1M4 99 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 SPRR3Q9UBC9 169 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 PPIAL4AQ9Y536 164 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 SLC25A15Q9Y619 301 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
CCDC93-208ENST00000474546 MED12Q93074 2177 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 SH2D7A6NKC9 451 aaPredicted RBP6.42□□□□□ -1.38
CCDC93-208ENST00000474546 K7EMI3 77 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 M0QZ24 198 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 ORM2P19652 201 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 RPL27AP46776 148 aaKnown RBP6.42□□□□□ -1.38
CCDC93-208ENST00000474546 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 TWIST1Q15672 202 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF474Q6S9Z5 364 aaPredicted RBP6.42□□□□□ -1.38
CCDC93-208ENST00000474546 PATE2Q6UY27 113 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 IFI27L1Q96BM0 104 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF48Q96MX3 618 aaPredicted RBP6.42□□□□□ -1.38
CCDC93-208ENST00000474546 GAFA1Q96PS6 74 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 SIGMAR1Q99720 223 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 RASL11BQ9BPW5 248 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 DCTN5Q9BTE1 182 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 ZNF407Q9C0G0 2248 aa6.42□□□□□ -1.38
CCDC93-208ENST00000474546 A0A087X0K7 114 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 TRAV5A0A0B4J249 113 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 TRAV8-6A0A0B4J262 113 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MBD3L4A6NDZ8 208 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MBD3L3A6NE82 208 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MBD3L5A6NJ08 208 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 CEACAM4O75871 244 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 IGKV1-16P04430 117 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 TMEM11P17152 192 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 GATA2P23769 480 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 SAMD5Q5TGI4 173 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MBD3L2Q8NHZ7 208 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 ITLN1Q8WWA0 313 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MRPL20Q9BYC9 149 aaKnown RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 MAP1LC3AQ9H492 121 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 NGBQ9NPG2 151 aa6.41□□□□□ -1.38
CCDC93-208ENST00000474546 F11RQ9Y624 299 aaKnown RBP6.41□□□□□ -1.38
CCDC93-208ENST00000474546 RYR3Q15413 4870 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms