RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRAC2D3DTV9 90 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 PLA2G10O15496 165 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 SCGB2A1O75556 95 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 LY6G6CO95867 125 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 OR4E1P0C645 316 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 SLC25A6P12236 298 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 PAX9P55771 341 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 RRAS2P62070 204 aaPredicted RBP4.99□□□□□ -1.61
VPS50-211ENST00000474412 GFI1BQ5VTD9 330 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 WDR73Q6P4I2 378 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 CEMP1Q6PRD7 247 aaPredicted RBP4.99□□□□□ -1.61
VPS50-211ENST00000474412 RPP25LQ8N5L8 163 aaKnown RBP4.99□□□□□ -1.61
VPS50-211ENST00000474412 GATAD1Q8WUU5 269 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 NARS2Q96I59 477 aaKnown RBP4.99□□□□□ -1.61
VPS50-211ENST00000474412 RAB40CQ96S21 281 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 TRGV9Q99603 122 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 C20orf85Q9H1P6 137 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 TMED3Q9Y3Q3 217 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
VPS50-211ENST00000474412 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 TRAV6A0A075B6T7 132 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 SMCO3A2RU48 225 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 ZNF705EA8MWA4 302 aaPredicted RBP4.98□□□□□ -1.61
VPS50-211ENST00000474412 CD5P06127 495 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 HLA-DRB4P13762 266 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 INPP1P49441 399 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 AKR1C1Q04828 323 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 OR8G2PQ6IF36 304 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 ZNF709Q8N972 641 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 DEDD2Q8WXF8 326 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 SEC22CQ9BRL7 303 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 SLC25A22Q9H936 323 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 MDFICQ9P1T7 246 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 XCL2Q9UBD3 114 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 HLA-DRB4X5D2U9 266 aa4.98□□□□□ -1.61
VPS50-211ENST00000474412 NAP1L6A6NFF2 107 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 H3BMM0 161 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 H3BRN7 92 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 LYRM1O43325 122 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 MED6O75586 246 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 IGLV2-11P01706 119 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 METTL15P1P0C7V9 234 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 SPP1P10451 314 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 HLA-DMBP28068 263 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 GPX4P36969 197 aaPredicted RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 CMC4P56277 68 aaPredicted RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 RAB11AP62491 216 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 RPP30P78346 268 aaKnown RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 SLC38A11Q08AI6 406 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 MORN3Q6PF18 240 aaPredicted RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 RNF182Q8N6D2 247 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 ZBTB8BQ8NAP8 495 aaPredicted RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 COQ8AQ8NI60 647 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 C11orf45Q8TAV5 145 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 PPP1R14BQ96C90 147 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 LINC00052Q96N35 136 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 UHRF2Q96PU4 802 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 SLC35B3Q9H1N7 401 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 NUDT15Q9NV35 164 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 PSENENQ9NZ42 101 aa4.97□□□□□ -1.61
VPS50-211ENST00000474412 STRAPQ9Y3F4 350 aaKnown RBP4.97□□□□□ -1.61
VPS50-211ENST00000474412 TRAV8-2A0A0B4J237 113 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 ZNF98A6NK75 572 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 SNRPCP09234 159 aaKnown RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 ZNF705DP0CH99 300 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 ZNF705BP0CI00 300 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 ORM2P19652 201 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 PSMB3P49720 205 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 VAMP2P63027 116 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 IAH1Q2TAA2 248 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 TMEM14EPQ6UXP3 125 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 CYP2G1PQ6ZSU1 146 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 OR1B1Q8NGR6 318 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 CIB3Q96Q77 187 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 SAV1Q9H4B6 383 aaPredicted RBP4.96□□□□□ -1.62
VPS50-211ENST00000474412 C11orf1Q9H5F2 150 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 TBC1D24Q9ULP9 559 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.62
VPS50-211ENST00000474412 IGHV3OR16-12A0A075B7B8 117 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 K7EPK0 472 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 TCRBP04435 133 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 PRM2P04554 102 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 LINC00869P0C866 280 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 MIFP14174 115 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 AP2S1P53680 142 aaPredicted RBP4.95□□□□□ -1.62
VPS50-211ENST00000474412 SNRPD3P62318 126 aaKnown RBP4.95□□□□□ -1.62
VPS50-211ENST00000474412 FAM78BQ5VT40 261 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 AMTNQ6UX39 209 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 PATE2Q6UY27 113 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 FOXI2Q6ZQN5 318 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 TMEM144Q7Z5S9 345 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 OR8I2Q8N0Y5 310 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 BPIFCQ8NFQ6 507 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 OR4B1Q8NGF8 309 aa4.95□□□□□ -1.62
VPS50-211ENST00000474412 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms