RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 VSIRQ9H7M9 311 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 JPT2Q9H910 190 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 SLC25A10Q9UBX3 287 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-209ENST00000474157 RELNP78509 3460 aa5.81□□□□□ -1.48
GPNMB-209ENST00000474157 EML5Q05BV3 1969 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 A0A1B0GVT2 93 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 A8MWL6 223 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 PRR32B1ATL7 298 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 SYNGR2O43760 224 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 PIRTP0C851 137 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 RPL13AP40429 203 aaKnown RBP5.8□□□□□ -1.48
GPNMB-209ENST00000474157 CXCL5P42830 114 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 CLDN2P57739 230 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 PPP1CAP62136 330 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 VWC2Q2TAL6 325 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 Q6ZT83 130 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 ANKRD29Q8N6D5 301 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 RND1Q92730 232 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 ARHGAP5-AS1Q96IT6 56 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 EDA2RQ9HAV5 297 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 PSENENQ9NZ42 101 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 USP9YO00507 2555 aaPredicted RBP5.8□□□□□ -1.48
GPNMB-209ENST00000474157 PCDH15Q96QU1 1955 aa5.8□□□□□ -1.48
GPNMB-209ENST00000474157 DOCK9Q9BZ29 2069 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 PLPP1O14494 284 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 HSPB6O14558 160 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 PRYO14603 147 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 SRSF10O75494 262 aaKnown RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 B4GALT1P15291 398 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 WT1P19544 449 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 NCBP2P52298 156 aaKnown RBP eCLIP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 DSCR4P56555 118 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 ARL16Q0P5N6 197 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 EBI3Q14213 229 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 SP6Q3SY56 376 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 PDPNQ86YL7 162 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 RPRMLQ8N4K4 120 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 MGST2Q99735 147 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 SRSF8Q9BRL6 282 aaKnown RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 NHP2Q9NX24 153 aaKnown RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 TCF19Q9Y242 345 aa5.79□□□□□ -1.48
GPNMB-209ENST00000474157 MUC22E2RYF6 1773 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-209ENST00000474157 TMED7-TICAM2A0A0A6YYA0 188 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 TRAV2A0A0B4J234 112 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 MYMXA0A1B0GTQ4 84 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 C1orf105O95561 183 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 NPYP01303 97 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 BGLAPP02818 100 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 MGST1P10620 155 aaKnown RBP5.78□□□□□ -1.48
GPNMB-209ENST00000474157 EDN2P20800 178 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 FXYD2P54710 66 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 SLC38A11Q08AI6 406 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 Q5XG85 94 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 TMEM14EPQ6UXP3 125 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 OR5AS1Q8N127 324 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 KLK6Q92876 244 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 CHAC1Q9BUX1 264 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 SPRY4Q9C004 299 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 ALKBH4Q9NXW9 302 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 PI4KAP42356 2102 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 PTPRBP23467 1997 aa5.78□□□□□ -1.48
GPNMB-209ENST00000474157 ARHGEF17Q96PE2 2063 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-209ENST00000474157 CABIN1Q9Y6J0 2220 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 A0A0A6YYD4 124 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 TRAV8-2A0A0B4J237 113 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 TRAV8-4A0A0B4J246 113 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 CXorf51AA0A1B0GTR3 108 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 ENSAO43768 121 aaKnown RBP5.77□□□□□ -1.49
GPNMB-209ENST00000474157 LMX1BO60663 402 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 FSHBP01225 129 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 RPL35AP18077 110 aaKnown RBP5.77□□□□□ -1.49
GPNMB-209ENST00000474157 CRYGSP22914 178 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 MRPL2Q5T653 305 aaKnown RBP5.77□□□□□ -1.49
GPNMB-209ENST00000474157 SLC25A48Q6ZT89 311 aaKnown RBP5.77□□□□□ -1.49
GPNMB-209ENST00000474157 C1orf158Q8N1D5 194 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 OR52N5Q8NH56 324 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 FAM57AQ8TBR7 257 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 RITA1Q96K30 269 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 LINC00477Q96M19 166 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 C1orf147Q96MC9 270 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-209ENST00000474157 GFRA4Q9GZZ7 299 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 CEP192Q8TEP8 1941 aa5.77□□□□□ -1.49
GPNMB-209ENST00000474157 FLNCQ14315 2725 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 LRRK1Q38SD2 2015 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 A0A1B0GWA3 101 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 A0A1B0GXF2 115 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 TMEM89A2RUT3 159 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 C15orf62A8K5M9 175 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 ATOX1O00244 68 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 ZIC3O60481 467 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms