RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 EVX1P49640 407 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 EBPQ15125 230 aaKnown RBP1.57□□□□□ -2.16
XRN1-210ENST00000472697 SPINK14Q6IE38 97 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 UBALD1Q8TB05 177 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 FAM210BQ96KR6 192 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 OR52E6Q96RD3 313 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 UPK3BQ9BT76 320 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 SSR3Q9UNL2 185 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 HYDINQ4G0P3 5121 aa1.57□□□□□ -2.16
XRN1-210ENST00000472697 NBPF19A0A087WUL8 3843 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 ANK2Q01484 3957 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 UTP20O75691 2785 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 IGKV1-9A0A0C4DH69 117 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 LOC107984640A0A0U1RRK4 108 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 G3V2T6 193 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 OR2T1O43869 369 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 MT-CO2P00403 227 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SLC25A16P16260 332 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 RPS3P23396 243 aaKnown RBP eCLIP1.56□□□□□ -2.16
XRN1-210ENST00000472697 RPL28P46779 137 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 EMP1P54849 157 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 PIGPP57054 158 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 TBPL1P62380 186 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 RELAQ04206 551 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 AMTNQ6UX39 209 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SDIM1Q6ZPB5 146 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 OOSP2Q86WS3 158 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 FAM24BQ8N5W8 94 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SPANXA2-OT1Q8N9U9 137 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 MUC7Q8TAX7 377 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 CCDC115Q96NT0 180 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 NAA38Q9BRA0 125 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 CACYBPQ9HB71 228 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 OTORQ9NRC9 128 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 TVP23BQ9NYZ1 205 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 FLNAP21333 2647 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 ABCA4P78363 2273 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 A0A087WUU8 490 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 TRAV4A0A0B4J268 109 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 C7orf66A4D0T2 115 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SHBGP04278 402 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 C8GP07360 202 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 DDTP30046 118 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SUPT4H1P63272 117 aaKnown RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 MEF2BQ02080 365 aaPredicted RBP1.56□□□□□ -2.16
XRN1-210ENST00000472697 TFF3Q07654 80 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 SLC38A11Q08AI6 406 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 BRMS1LQ5PSV4 323 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 C12orf29Q8N999 325 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 ZNF675Q8TD23 568 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 EFCAB1Q9HAE3 211 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 LRTM1Q9HBL6 345 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 TAF9BQ9HBM6 251 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 PRR34Q9NV39 138 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 TAAR3PQ9P1P4 343 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 PYCARDQ9ULZ3 195 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 R4GN34 69 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 COL12A1Q99715 3063 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 ACANP16112 2415 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 VWFP04275 2813 aa1.56□□□□□ -2.16
XRN1-210ENST00000472697 NIPBLQ6KC79 2804 aaeCLIP1.56□□□□□ -2.16
XRN1-210ENST00000472697 KIAA1549Q9HCM3 1950 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 IGHV3OR15-7A0A075B7D8 119 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 IGHV1-69-2A0A0G2JMI3 117 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 UBE2L6O14933 153 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 OR2J2O76002 312 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 KRTAP10-12P60413 245 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 LCN6P62502 163 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 ZNF880Q6PDB4 577 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 TCF24Q7RTU0 167 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 ZNF720Q7Z2F6 126 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 CNEP1R1Q8N9A8 125 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 ZHX1-C8orf76Q96EF9 292 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 TM2D3Q9BRN9 247 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
XRN1-210ENST00000472697 LAMA1P25391 3075 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 NBEAL1Q6ZS30 2694 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 LRCOL1A6NCL2 159 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 RIIAD1A6NNX1 92 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 GGTLC3B5MD39 225 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 PPP5D1E7EU14 171 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 H7C1C5 153 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 C19orf84I3L1E1 186 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 M0QZK8 103 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 PAEPP09466 180 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 CD7P09564 240 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 CRHBPP24387 322 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 PSMB8P28062 276 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 SDC4P31431 198 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 AKR1C3P42330 323 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 TAS2R30P59541 319 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 RAB4BP61018 213 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 ZNF816Q0VGE8 651 aaPredicted RBP1.55□□□□□ -2.16
XRN1-210ENST00000472697 TSNQ15631 228 aaKnown RBP1.55□□□□□ -2.16
XRN1-210ENST00000472697 SCIMPQ6UWF3 145 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 RNF175Q8N4F7 328 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 WFDC11Q8NEX6 87 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 CD200R1Q8TD46 325 aa1.55□□□□□ -2.16
XRN1-210ENST00000472697 ADAT3Q96EY9 351 aaPredicted RBP1.55□□□□□ -2.16
XRN1-210ENST00000472697 TCEAL2Q9H3H9 227 aaPredicted RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms