RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 C1QL4Q86Z23 238 aa9.81□□□□□ -0.84
IRF1-208ENST00000472045 PSCAO43653 123 aa9.81□□□□□ -0.84
IRF1-208ENST00000472045 LHBP01229 141 aa9.81□□□□□ -0.84
IRF1-208ENST00000472045 COX6CP09669 75 aa9.81□□□□□ -0.84
IRF1-208ENST00000472045 ZMAT4Q9H898 229 aa9.81□□□□□ -0.84
IRF1-208ENST00000472045 VCX2Q9H322 139 aa9.8□□□□□ -0.84
IRF1-208ENST00000472045 MRPL27Q9P0M9 148 aaKnown RBP9.8□□□□□ -0.84
IRF1-208ENST00000472045 MRPS16Q9Y3D3 137 aaKnown RBP9.8□□□□□ -0.84
IRF1-208ENST00000472045 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
IRF1-208ENST00000472045 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
IRF1-208ENST00000472045 OR11H2Q8NH07 326 aa9.8□□□□□ -0.84
IRF1-208ENST00000472045 AGMATQ9BSE5 352 aa9.8□□□□□ -0.84
IRF1-208ENST00000472045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
IRF1-208ENST00000472045 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
IRF1-208ENST00000472045 HINT1P49773 126 aaPredicted RBP9.79□□□□□ -0.84
IRF1-208ENST00000472045 DAD1P61803 113 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 GTF2H5Q6ZYL4 71 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 OCC1Q8TAD7 63 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 CCL24O00175 119 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 PPBPP02775 128 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 PGPEP1LA6NFU8 196 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 PDE6HQ13956 83 aa9.79□□□□□ -0.84
IRF1-208ENST00000472045 ABCA1O95477 2261 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
IRF1-208ENST00000472045 FOXC2Q99958 501 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 C1orf194Q5T5A4 169 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 LRRC75A-AS1Q8N1F1 130 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 TMEM158Q8WZ71 300 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 CYSLTR1Q9Y271 337 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 PLXNB3Q9ULL4 1909 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 CD28P10747 220 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 HOXA5P20719 270 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 TMEM95Q3KNT9 176 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
IRF1-208ENST00000472045 SPG11Q96JI7 2443 aa9.77□□□□□ -0.84
IRF1-208ENST00000472045 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.84
IRF1-208ENST00000472045 DNLZQ5SXM8 178 aa9.77□□□□□ -0.84
IRF1-208ENST00000472045 MRAPQ8TCY5 172 aa9.77□□□□□ -0.84
IRF1-208ENST00000472045 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.84
IRF1-208ENST00000472045 F5H768 121 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 SH2D1AO60880 128 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
IRF1-208ENST00000472045 SRSF1Q07955 248 aaKnown RBP eCLIP9.77□□□□□ -0.85
IRF1-208ENST00000472045 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
IRF1-208ENST00000472045 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
IRF1-208ENST00000472045 WT1-ASQ06250 92 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 ERCC8Q13216 396 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 SPINK13Q1W4C9 94 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
IRF1-208ENST00000472045 KRTAP27-1Q3LI81 207 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 TTC9CQ8N5M4 171 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 RNF182Q8N6D2 247 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 NUDT10Q8NFP7 164 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 NUDT11Q96G61 164 aa9.77□□□□□ -0.85
IRF1-208ENST00000472045 IFITM2Q01629 132 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 GZMBP10144 247 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 EVI2AP22794 236 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 SRSF4Q08170 494 aaKnown RBP9.76□□□□□ -0.85
IRF1-208ENST00000472045 FOXE3Q13461 319 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
IRF1-208ENST00000472045 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
IRF1-208ENST00000472045 CARHSP1Q9Y2V2 147 aaKnown RBP9.76□□□□□ -0.85
IRF1-208ENST00000472045 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
IRF1-208ENST00000472045 RNF151Q2KHN1 245 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 ZNF876PQ49A33 203 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
IRF1-208ENST00000472045 TRAV8-1A0A0A6YYK1 113 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
IRF1-208ENST00000472045 OBSL1O75147 1896 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 LIME1Q9H400 295 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 DEFB136Q30KP8 78 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 HIVEP2P31629 2446 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 A0A087WWC5 75 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 ERASQ7Z444 233 aa9.75□□□□□ -0.85
IRF1-208ENST00000472045 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
IRF1-208ENST00000472045 IGFBPL1Q8WX77 278 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 Q8NFD4 153 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 PARD6GQ9BYG4 376 aaPredicted RBP9.74□□□□□ -0.85
IRF1-208ENST00000472045 FGF23Q9GZV9 251 aaPredicted RBP9.74□□□□□ -0.85
IRF1-208ENST00000472045 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 ARL6IP6Q8N6S5 226 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 VPS25Q9BRG1 176 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 CENPFP49454 3210 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 SMIM6P0DI80 62 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
IRF1-208ENST00000472045 BLCAPP62952 87 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 ST6GALNAC6Q969X2 333 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms