RNA–Protein interactions for RNA: ENST00000471693.1

SRRM1-209, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-209ENST00000471693 CACYBPQ9HB71 228 aaKnown RBP0.14□□□□□ -2.39
SRRM1-209ENST00000471693 SYNE1Q8NF91 8797 aaKnown RBP0.14□□□□□ -2.39
SRRM1-209ENST00000471693 CCDC144AA2RUR9 1427 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 APCP25054 2843 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 hDV103S1A0JD37 113 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 APOA2P02652 100 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 CD14P08571 375 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 TMBIM6P55061 237 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 NCALDP61601 193 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 KLRD1Q13241 179 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 C5orf17Q8NAS9 161 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 OR2J1Q9GZK6 312 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 PLB1Q6P1J6 1458 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 FREM3P0C091 2139 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 MYH7BA7E2Y1 1941 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 KIF1BO60333 1816 aa0.13□□□□□ -2.39
SRRM1-209ENST00000471693 PRORSD1PA6NEY8 169 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 G3V2T6 193 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 RER1O15258 196 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 SPTBP11277 2137 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 MRPS25P82663 173 aaKnown RBP0.12□□□□□ -2.39
SRRM1-209ENST00000471693 REEP5Q00765 189 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 TMED2Q15363 201 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 VMA21Q3ZAQ7 101 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 ZGRF1Q86YA3 2104 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 FAM103A1Q9BTL3 118 aaKnown RBP0.12□□□□□ -2.39
SRRM1-209ENST00000471693 SIP14410 1827 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 ZDBF2Q9HCK1 2354 aa0.12□□□□□ -2.39
SRRM1-209ENST00000471693 TNCP24821 2201 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 C9orf170A2RU37 121 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 B4DSR2 109 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 SULT1C4O75897 302 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 ATP5HO75947 161 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 CD3DP04234 171 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 CRHP06850 196 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 HSPE1P61604 102 aaKnown RBP0.11□□□□□ -2.39
SRRM1-209ENST00000471693 TMEM14EPQ6UXP3 125 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 CASC2Q6XLA1 102 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 GRPEL2Q8TAA5 225 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 NEK7Q8TDX7 302 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 PLAC4Q8WY50 150 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 RMND5BQ96G75 393 aaPredicted RBP0.11□□□□□ -2.39
SRRM1-209ENST00000471693 CEP19Q96LK0 163 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 AP1S3Q96PC3 154 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 CCL19Q99731 98 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 PBDC1Q9BVG4 233 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 PYCARDQ9ULZ3 195 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 ZFYVE9O95405 1425 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 PTPRFP10586 1907 aa0.11□□□□□ -2.39
SRRM1-209ENST00000471693 PHRF1Q9P1Y6 1649 aaKnown RBP0.1□□□□□ -2.39
SRRM1-209ENST00000471693 TRAV5A0A0B4J249 113 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 RIIAD1A6NNX1 92 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 H7C1C5 153 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 HIST1H2BKO60814 126 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 IGLV1-51P01701 117 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 HIST1H2BJP06899 126 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 CST2P09228 141 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 OGNP20774 298 aaKnown RBP0.1□□□□□ -2.39
SRRM1-209ENST00000471693 PPP1R2P41236 205 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 ARPP19P56211 112 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 CAV3P56539 151 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 LCN6P62502 163 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 DIAPH2-AS1Q14236 149 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 AKR1C8PQ5T2L2 129 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 PATE2Q6UY27 113 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 C10orf111Q8N326 155 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 CST11Q9H112 138 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 SSR3Q9UNL2 185 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 BCL9O00512 1426 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 MGAMO43451 1857 aa0.1□□□□□ -2.39
SRRM1-209ENST00000471693 FANCMQ8IYD8 2048 aa0.09□□□□□ -2.39
SRRM1-209ENST00000471693 RFX7Q2KHR2 1363 aa0.09□□□□□ -2.39
SRRM1-209ENST00000471693 KNTC1P50748 2209 aa0.09□□□□□ -2.39
SRRM1-209ENST00000471693 ODAMA1E959 279 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 IGHV3-33P01772 117 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 CXCL1P09341 107 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 KRTAP2-3P0C7H8 128 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 PHBP35232 272 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 RPL37AP61513 92 aaKnown RBP0.09□□□□□ -2.4
SRRM1-209ENST00000471693 MIR22HGQ0VDD5 57 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 SPINK13Q1W4C9 94 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 PRR15Q8IV56 129 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.09□□□□□ -2.4
SRRM1-209ENST00000471693 MALSU1Q96EH3 234 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 PRAP1Q96NZ9 151 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 KRTAP2-4Q9BYR9 128 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 KRTAP2-1Q9BYU5 128 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 ARMC1Q9NVT9 282 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 TPRKBQ9Y3C4 175 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 CEP164Q9UPV0 1460 aa0.09□□□□□ -2.4
SRRM1-209ENST00000471693 FRAS1Q86XX4 4008 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 PTPRZ1P23471 2315 aaPredicted RBP0.08□□□□□ -2.4
SRRM1-209ENST00000471693 PLXNA4Q9HCM2 1894 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 MYO5AQ9Y4I1 1855 aaKnown RBP0.08□□□□□ -2.4
SRRM1-209ENST00000471693 MIA2Q96PC5 1412 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 ERBINQ96RT1 1412 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 A0A0J9YY99 117 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 C5orf58C9J3I9 102 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 ATG12O94817 140 aa0.08□□□□□ -2.4
SRRM1-209ENST00000471693 MT-ND6P03923 174 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms