RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 H3BMM0 161 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 C3orf84H3BNL1 204 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 LY6HO94772 140 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 CTSDP07339 412 aaPredicted RBP2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 CCL5P13501 91 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 LSM3P62310 102 aaKnown RBP2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 Q56UQ5 140 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 LCN9Q8WX39 176 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 DIRC1Q969H9 104 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 UBE2WQ96B02 151 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 BAZ1AQ9NRL2 1556 aaPredicted RBP2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 ANKRD26Q9UPS8 1709 aa2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 LSM2Q9Y333 95 aaKnown RBP2.89□□□□□ -1.95
PRPF40A-206ENST00000471167 KDM5AP29375 1690 aaKnown RBP2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 TOPBP1Q92547 1522 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 NRKQ7Z2Y5 1582 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 GRIFINA4D1Z8 144 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 C19orf71A6NCJ1 209 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 C17orf51A8MQB3 221 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 H3BT86 120 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 APOC4-APOC2K7ER74 178 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 NPYP01303 97 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 APOC2P02655 101 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 Q6ZUT4 128 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 MIR7-3HGQ8N6C7 128 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 CLDND2Q8NHS1 167 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 SLC35B3Q9H1N7 401 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 SAR1AQ9NR31 198 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 OR5V1Q9UGF6 321 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 TRAPPC1Q9Y5R8 145 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 ICOSQ9Y6W8 199 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 MYH9P35579 1960 aaKnown RBP2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 SIPA1L1O43166 1804 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 OBSL1O75147 1896 aa2.88□□□□□ -1.95
PRPF40A-206ENST00000471167 MYH6P13533 1939 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 ANKRD36BQ8N2N9 1353 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 CITO14578 2027 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 TCRBV3S1A0A5B6 114 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 OR51F1A6NGY5 319 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 OR1I1O60431 355 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 PMP2P02689 132 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 TPT1P13693 172 aaKnown RBP2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 DYNLT1P63172 113 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 KLRD1Q13241 179 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 ZNF846Q147U1 533 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 CDK5R1Q15078 307 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 MIAQ16674 131 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 KHDC3LQ587J8 217 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 PATE2Q6UY27 113 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 C3orf56Q8N813 242 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 LINC00526Q96FQ7 95 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 PKMYT1Q99640 499 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 DPY30Q9C005 99 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 ZNF355PQ9NSJ1 428 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 U3KQK5 164 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 QRICH2Q9H0J4 1663 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 COL18A1P39060 1754 aa2.87□□□□□ -1.95
PRPF40A-206ENST00000471167 COL1A1P02452 1464 aaPredicted RBP2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 IGHV3-73A0A0B4J1V6 119 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 A0A0D9SG52 128 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 C3orf85A0A1B0GTC6 90 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 MDFIC2A0A1B0GVS7 189 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 SMIM31A0A1B0GVY4 71 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 A0A1W2PRS3 328 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 MCRIP1C9JLW8 97 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 TCL1BO95988 128 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 TRACP01848 142 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RBP4P02753 201 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 CD3DP04234 171 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 PCBD1P61457 104 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 MRPS36P82909 103 aaKnown RBP2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 Q6AWC8 147 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 SDIM1Q6ZPB5 146 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 C10orf111Q8N326 155 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 FAM216BQ8N7L0 139 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 OR4X2Q8NGF9 303 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 PFN4Q8NHR9 129 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 SMCR5Q8TEV8 140 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RAB37Q96AX2 223 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 VAMP8Q9BV40 100 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 LINC00574Q9H8X3 128 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 SERP1Q9Y6X1 66 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 MAP3K1Q13233 1512 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RIMBP3CA6NJZ7 1639 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RIMBP3BA6NNM3 1639 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RIMBP3Q9UFD9 1639 aa2.86□□□□□ -1.95
PRPF40A-206ENST00000471167 RRBP1Q9P2E9 1410 aaKnown RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 SVILO95425 2214 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 CFTRP13569 1480 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 KIF13AQ9H1H9 1805 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 CREBL2O60519 120 aaPredicted RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 PITX3O75364 302 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 FUSP35637 526 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 BLCAPP62952 87 aa2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 SUPT4H1P63272 117 aaKnown RBP2.85□□□□□ -1.95
PRPF40A-206ENST00000471167 C6orf52Q5T4I8 152 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms