RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TRBV7-6A0A0J9YX20 115 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 A0A1B0GV90 55 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 A8MWV9 139 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 FAM25AB3EWG3 89 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 FAM25CB3EWG5 89 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 FAM25GB3EWG6 89 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 DNAJB13P59910 316 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 DYNLT1P63172 113 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 RHOGP84095 191 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 ZNF846Q147U1 533 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 ELOBQ15370 118 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
BRCA2-202ENST00000470094 SPANXN5Q5MJ07 72 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 LINC00299Q6ZSB3 139 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 PDZD9Q8IXQ8 264 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 SLC30A7Q8NEW0 376 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 TMEM203Q969S6 136 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 TCEAL7Q9BRU2 100 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 ADAT1Q9BUB4 502 aaKnown RBP1.38□□□□□ -2.19
BRCA2-202ENST00000470094 SMG6Q86US8 1419 aaKnown RBP1.38□□□□□ -2.19
BRCA2-202ENST00000470094 ZFHX2Q9C0A1 2572 aaPredicted RBP1.38□□□□□ -2.19
BRCA2-202ENST00000470094 MYH10P35580 1976 aa1.38□□□□□ -2.19
BRCA2-202ENST00000470094 FER1L6Q2WGJ9 1857 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 FAM135AQ9P2D6 1515 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 NCKAP5O14513 1909 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 SMIM31A0A1B0GVY4 71 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 GABARAPH6UMI1 98 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 DEGS1O15121 323 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 TPST1O60507 370 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 HIST1H2BKO60814 126 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 CST7O76096 145 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 TNFSF15O95150 251 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 HIST1H2BJP06899 126 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 TSPAN19P0C672 248 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 BAALC-AS2P0C853 105 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 ZNF705BP0CI00 300 aaPredicted RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 S100A11P31949 105 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 AKR1C3P42330 323 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 RPL35P42766 123 aaKnown RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 RBP2P50120 134 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 ARPP19P56211 112 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 OR8B8Q15620 311 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 SOSTDC1Q6X4U4 206 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 FP248Q71RG6 208 aaPredicted RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 CROCCP2Q86T23 111 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 LINC00471Q8N535 108 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 OR8J3Q8NGG0 315 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 Q96M85 177 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 TCEAL2Q9H3H9 227 aaPredicted RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 BCL2L10Q9HD36 194 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 MED9Q9NWA0 146 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 RNF11Q9Y3C5 154 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 MED14O60244 1454 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 TCOF1Q13428 1488 aaKnown RBP1.37□□□□□ -2.19
BRCA2-202ENST00000470094 GAPVD1Q14C86 1478 aa1.37□□□□□ -2.19
BRCA2-202ENST00000470094 MED23Q9ULK4 1368 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 WNK3Q9BYP7 1800 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 IGKV1D-42A0A075B6H8 117 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 IGHV1-58A0A0C4DH39 117 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 OVOS2A0A0G2JMS6 1433 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 CRPP02741 224 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 CXCL1P09341 107 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 SCTP09683 121 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 CLIP1P30622 1438 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 HBBP68871 147 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 ESRGQ1W209 222 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 MORN2Q502X0 79 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 EIF5AL1Q6IS14 154 aaKnown RBP1.36□□□□□ -2.19
BRCA2-202ENST00000470094 TTC37Q6PGP7 1564 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 HRCT1Q6UXD1 115 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 ACBD7Q8N6N7 88 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 TMEM229BQ8NBD8 167 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 THOC2Q8NI27 1593 aaKnown RBP1.36□□□□□ -2.19
BRCA2-202ENST00000470094 PFDN5Q99471 154 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 C14orf132Q9NPU4 83 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 NAT8BQ9UHF3 227 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 MYLKQ15746 1914 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 IFT140Q96RY7 1462 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 PSME4Q14997 1843 aa1.36□□□□□ -2.19
BRCA2-202ENST00000470094 ARHGEF11O15085 1522 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 AKAP11Q9UKA4 1901 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 A0A096LPI6 279 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 ODAMA1E959 279 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 CCDC160A6NGH7 325 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 TIMM17BO60830 172 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 DBIP07108 87 aaKnown RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 HIST1H1BP16401 226 aaKnown RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 TMBIM6P55061 237 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 SELENOWP63302 87 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 SMIM21Q3B7S5 101 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 Q8IYB0 196 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 OR4C6Q8NH72 309 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 ZNF418Q8TF45 676 aaPredicted RBP1.35□□□□□ -2.19
BRCA2-202ENST00000470094 MCEEQ96PE7 176 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 SLC50A1Q9BRV3 221 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 TMEM138Q9NPI0 162 aa1.35□□□□□ -2.19
BRCA2-202ENST00000470094 GSKIPQ9P0R6 139 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms