RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 ZNF493Q6ZR52 646 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 MIR17HGQ75NE6 70 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 BATF2Q8N1L9 274 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LINC01356Q8N9X3 169 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 NRGNQ92686 78 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LINC01587Q99440 93 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 HIST1H2BLQ99880 126 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 TMEM160Q9NX00 188 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 HILPDAQ9Y5L2 63 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LOC389332A0A1B0GUA5 103 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 GRIFINA4D1Z8 144 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LY6G6DO95868 133 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 ZFP36P26651 326 aaKnown RBP5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 SHISA2Q6UWI4 295 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 PNRC2Q9NPJ4 139 aaKnown RBP5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 ZFC3H1O60293 1989 aaKnown RBP5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 IGHV1-3A0A0C4DH29 117 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 MSGN1A6NI15 193 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 IGLV3-1P01715 115 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 CRYBA4P53673 196 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 PAX2Q02962 417 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LHFPL4Q7Z7J7 247 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 LYPD6BQ8NI32 183 aa5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 DAZ1Q9NQZ3 744 aaKnown RBP5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 PRRC2AP48634 2157 aaKnown RBP5.01□□□□□ -1.61
CCDC144A-212ENST00000470068 TDGF1P13385 188 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 A0A1W2PR80 420 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 RAMP3O60896 148 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 OCC1Q8TAD7 63 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 LYZL4Q96KX0 146 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 TRAV8-6A0A0B4J262 113 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 IGHG4P01861 327 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 CD28P10747 220 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 VGLL1Q99990 258 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 ZNF815PA8K554 130 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 C9JQL5 133 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 BUB1B-PAK6H3BSN5 160 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 SYS1-DBNDD2H3BUS1 97 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 DLEU1O43261 78 aa5□□□□□ -1.61
CCDC144A-212ENST00000470068 CEACAM8P31997 349 aaPredicted RBP5□□□□□ -1.61
CCDC144A-212ENST00000470068 SIPA1L1O43166 1804 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 C5orf63A6NC05 138 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 MLNRO43193 412 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 RNASE2P10153 161 aaKnown RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 ADMP35318 185 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 TFF3Q07654 80 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 FOXF2Q12947 444 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 MRPL23Q16540 153 aaKnown RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 ZNF826PQ6ZT77 177 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 Q86TA4 180 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 C9orf106Q8NAJ2 232 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 PPDPFLQ8WWR9 84 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 LOC102724200A0A096LPH7 203 aaPredicted RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 PSMB11A5LHX3 300 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 TBX6O95947 436 aaPredicted RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 IGLV1-44P01699 117 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 RPL15P61313 204 aaKnown RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 LAMTOR3Q9UHA4 124 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 COX11Q9Y6N1 276 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 WNK2Q9Y3S1 2297 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 HELZ2Q9BYK8 2649 aaKnown RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 IGLV3-9A0A075B6K5 115 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 A0A1W2PPI3 338 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 H0YGX0 51 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 CRXO43186 299 aaPredicted RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 CXCL5P42830 114 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 APOC4P55056 127 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 HERVK_113P63121 156 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 ZNF672Q499Z4 452 aaPredicted RBP4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 TMSB15BA0A087X1C1 80 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 B3GALT5-AS1P59052 145 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 ERCC8Q13216 396 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 RPL39P5Q59GN2 51 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 VMO1Q7Z5L0 202 aa4.99□□□□□ -1.61
CCDC144A-212ENST00000470068 TDRD6O60522 2096 aaKnown RBP4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 ATRQ13535 2644 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 ESDP10768 282 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PPIFP30405 207 aaKnown RBP4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 HIGD1BQ9P298 99 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 SMIM27A0A1W2PRY6 76 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 STPG4Q8N801 248 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 NDUFA4L2Q9NRX3 87 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 SCN3AQ9NY46 2000 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PIEZO2Q9H5I5 2752 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 SHISA3A0PJX4 238 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 A8MWP6 167 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 I3L3M4 83 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PRKNO60260 465 aaPredicted RBP4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PFN1P07737 140 aaKnown RBP4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PSG1P11464 419 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 EGR1P18146 543 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 PAX9P55771 341 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 CKS1BP61024 79 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 LY6EQ16553 131 aa4.98□□□□□ -1.61
CCDC144A-212ENST00000470068 GAFA1Q96PS6 74 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms