RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 FOXH1O75593 365 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 IGHV3-23P01764 117 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 Q8TCH9 128 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 RAB1CQ92928 201 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 ASCL2Q99929 193 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 CFAP46Q8IYW2 2715 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 C17orf58Q2M2W7 97 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 GPR82Q96P67 336 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 SCRT2Q9NQ03 307 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.81
USP11-206ENST00000469080 SYT8Q8NBV8 401 aa9.96□□□□□ -0.81
USP11-206ENST00000469080 PTPRBP23467 1997 aa9.96□□□□□ -0.81
USP11-206ENST00000469080 K7ENP7 123 aa9.96□□□□□ -0.82
USP11-206ENST00000469080 HLA-DQA1P01909 254 aa9.96□□□□□ -0.82
USP11-206ENST00000469080 RBP4P02753 201 aa9.96□□□□□ -0.82
USP11-206ENST00000469080 RAB1BQ9H0U4 201 aa9.96□□□□□ -0.82
USP11-206ENST00000469080 FBXL15Q9H469 300 aa9.96□□□□□ -0.82
USP11-206ENST00000469080 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 CHEK1O14757 476 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 LEPROTL1O95214 131 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 KLF17Q5JT82 389 aaPredicted RBP9.95□□□□□ -0.82
USP11-206ENST00000469080 NPIPB3Q92617 1050 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
USP11-206ENST00000469080 A4D1N5 150 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 GUSBP1Q15486 140 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 VWC2Q2TAL6 325 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 IGFL3Q6UXB1 125 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
USP11-206ENST00000469080 TRAV9-1A0A075B6T8 112 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 IGHV3OR16-13A0A075B7E8 117 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 IGHV3-74A0A0B4J1X5 117 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 TRAV5A0A0B4J249 113 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 CEACAM4O75871 244 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 AMY1AP04745 511 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 ERHP84090 104 aaKnown RBP9.95□□□□□ -0.82
USP11-206ENST00000469080 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
USP11-206ENST00000469080 HES4Q9HCC6 221 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 SSUH2Q9Y2M2 353 aa9.95□□□□□ -0.82
USP11-206ENST00000469080 A1L4Q6 167 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 PPIFP30405 207 aaKnown RBP9.94□□□□□ -0.82
USP11-206ENST00000469080 VDAC2P45880 294 aaPredicted RBP9.94□□□□□ -0.82
USP11-206ENST00000469080 CAMPP49913 170 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 Q6ZS49 121 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 ZBTB34Q8NCN2 500 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 TPPP3Q9BW30 176 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 RABAC1Q9UI14 185 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 F11RQ9Y624 299 aaKnown RBP9.94□□□□□ -0.82
USP11-206ENST00000469080 LOXL3P58215 753 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
USP11-206ENST00000469080 MIR17HGQ75NE6 70 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 RITA1Q96K30 269 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 CTSZQ9UBR2 303 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 TRBV6-6A0A0A6YYG2 114 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 TMEM189A5PLL7 270 aa9.94□□□□□ -0.82
USP11-206ENST00000469080 HIVEP2P31629 2446 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 CT45A6P0DMU7 189 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 CT45A5P0DMU8 189 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 CT45A7P0DMV0 189 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 TEPPQ6URK8 271 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 K7EN84 100 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 GCSHP23434 173 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 VGLL1Q99990 258 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 KCNIP2Q9NS61 270 aa9.93□□□□□ -0.82
USP11-206ENST00000469080 HLA-DRB1P01911 266 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 ANKRD17O75179 2603 aaKnown RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 E7EUB6 86 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 SMIM13P0DJ93 91 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 CX3CL1P78423 397 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 TRAT1Q6PIZ9 186 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 MAP1LC3CQ9BXW4 147 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 RAB9BQ9NP90 201 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 COL27A1Q8IZC6 1860 aaPredicted RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 DOPEY1Q5JWR5 2465 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 TRBV20-1A0A075B6N2 111 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 PRTN3P24158 256 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 TMEM14EPQ6UXP3 125 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 DDB2Q92466 427 aa9.92□□□□□ -0.82
USP11-206ENST00000469080 LSM4Q9Y4Z0 139 aaKnown RBP9.92□□□□□ -0.82
USP11-206ENST00000469080 H3BMG7 143 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 COX8AP10176 69 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 MFAP2P55001 183 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 LYZP61626 148 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 VCX2Q9H322 139 aa9.91□□□□□ -0.82
USP11-206ENST00000469080 PYYP10082 97 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms