RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SELENOKQ9Y6D0 94 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 U3KQE9 123 aa6.15□□□□□ -1.42
HDAC6-216ENST00000468949 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 IFNA1P01562 189 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 STAG3L2P0CL84 134 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 PYYP10082 97 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 HIST1H1EP10412 219 aaKnown RBP6.14□□□□□ -1.43
HDAC6-216ENST00000468949 GP9P14770 177 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 FHITP49789 147 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 PPT1P50897 306 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 FGF8P55075 233 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-216ENST00000468949 DEFB114Q30KQ6 69 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 MORN5Q5VZ52 161 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF767PQ75MW2 155 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 TMEM61Q8N0U2 210 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 WFDC9Q8NEX5 89 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 SPAG8Q99932 426 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-216ENST00000468949 SLC50A1Q9BRV3 221 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
HDAC6-216ENST00000468949 WNK1Q9H4A3 2382 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 A0A087X0K7 114 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 TSPAN4O14817 238 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
HDAC6-216ENST00000468949 IGLV1-51P01701 117 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 SNRPCP09234 159 aaKnown RBP6.13□□□□□ -1.43
HDAC6-216ENST00000468949 GCHFRP30047 84 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 PSMB3P49720 205 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 PSG9Q00887 426 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 PDE6HQ13956 83 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 SAT2Q96F10 170 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-216ENST00000468949 MS4A6AQ9H2W1 248 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 HRH4Q9H3N8 390 aa6.13□□□□□ -1.43
HDAC6-216ENST00000468949 MEGF8Q7Z7M0 2845 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 TRAV2A0A0B4J234 112 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 H3BTX0 84 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 NBEAP1P0C6P0 100 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 IGLC2P0DOY2 106 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 CSN1S1P47710 185 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF726P1Q15940 193 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 ADAMTSL5Q6ZMM2 481 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 SSX7Q7RTT5 188 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 CMTM2Q8TAZ6 248 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 LINC00052Q96N35 136 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 MANBALQ9NQG1 85 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 CLEC5AQ9NY25 188 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
HDAC6-216ENST00000468949 TRBV19A0A075B6N1 114 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 ISLRO14498 428 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF253O75346 499 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF688P0C7X2 276 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 CMC4P56277 68 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-216ENST00000468949 CD81P60033 236 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 UBE2G2P60604 165 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 DEFA6Q01524 100 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 PSMG4Q5JS54 123 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 FAM90A2PQ658T7 463 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 MBD3L1Q8WWY6 194 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 FXYD5Q96DB9 178 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 RPH3ALQ9UNE2 315 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF256Q9Y2P7 627 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-216ENST00000468949 VWFP04275 2813 aa6.11□□□□□ -1.43
HDAC6-216ENST00000468949 TRAV1-1A0A0B4J248 108 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 IZUMO1RA6ND01 250 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 H3BQ15 152 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 K7EQM0 130 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
HDAC6-216ENST00000468949 TAGLN2P37802 199 aaKnown RBP6.1□□□□□ -1.43
HDAC6-216ENST00000468949 RANP62826 216 aaKnown RBP6.1□□□□□ -1.43
HDAC6-216ENST00000468949 LYPD1Q8N2G4 141 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 NKX6-2Q9C056 277 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-216ENST00000468949 Q9H3A6 140 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF331Q9NQX6 463 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-216ENST00000468949 OTORQ9NRC9 128 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF586Q9NXT0 402 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 PRELID1Q9Y255 219 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 SMAD5-AS1Q9Y6J3 95 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 ARL2-SNX15V9GYD0 113 aa6.1□□□□□ -1.43
HDAC6-216ENST00000468949 F6UZH7 168 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 G3V4G9 280 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 K7EQG2 157 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 SLC17A3O00476 420 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 MRPS12O15235 138 aaKnown RBP6.09□□□□□ -1.43
HDAC6-216ENST00000468949 DEFB131AP59861 70 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 ICAM4Q14773 271 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 BEAN1Q3B7T3 259 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 KPRPQ5T749 579 aaPredicted RBP6.09□□□□□ -1.43
HDAC6-216ENST00000468949 EBLN2Q6P2I7 272 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms