RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 OCC1Q8TAD7 63 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 LINC00479Q96M42 142 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 AAMDCQ9H7C9 122 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 MTORP42345 2549 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 TSPAN4O14817 238 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 TAS2R60P59551 318 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 PSG9Q00887 426 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 RPEL1Q2QD12 228 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 TUBA4BQ9H853 241 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 LY96Q9Y6Y9 160 aa14.54□□□□□ -0.08
SMC4-209ENST00000468653 TRAV34A0A0B4J273 112 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 TCRAP04437 139 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 UBE2G1P62253 170 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 GPHB5Q86YW7 130 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 ISOC2Q96AB3 205 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 JMJD8Q96S16 334 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 CTDSP1Q9GZU7 261 aa14.53□□□□□ -0.08
SMC4-209ENST00000468653 A0A087X0K7 114 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 A0A1W2PS18 150 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 INAFM1C9JVW0 142 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 C16orf54Q6UWD8 224 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 GRAMD2BQ96HH9 432 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 IGF2BP2-AS1Q96M15 143 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 DAZ1Q9NQZ3 744 aaKnown RBP14.52□□□□□ -0.09
SMC4-209ENST00000468653 TMEM242Q9NWH2 141 aa14.52□□□□□ -0.09
SMC4-209ENST00000468653 ISLRO14498 428 aa14.51□□□□□ -0.09
SMC4-209ENST00000468653 ZNF253O75346 499 aa14.51□□□□□ -0.09
SMC4-209ENST00000468653 S100A9P06702 114 aaKnown RBP14.51□□□□□ -0.09
SMC4-209ENST00000468653 TMEM183BQ1AE95 376 aa14.51□□□□□ -0.09
SMC4-209ENST00000468653 ANAPC16Q96DE5 110 aa14.51□□□□□ -0.09
SMC4-209ENST00000468653 TMA7Q9Y2S6 64 aaKnown RBP14.51□□□□□ -0.09
SMC4-209ENST00000468653 CXorf65A6NEN9 183 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 H7BYZ3 331 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 TM4SF20Q53R12 229 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 KHDC1LQ5JSQ8 128 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 GOLT1AQ6ZVE7 132 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 BAGE2Q86Y30 109 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 C15orf54Q8N8G6 183 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 FMC1Q96HJ9 113 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 UFC1Q9Y3C8 167 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 KLF12Q9Y4X4 402 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 K7EMT4 169 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 K7EN84 100 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 CSN1S1P47710 185 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 CDX1P47902 265 aaPredicted RBP14.5□□□□□ -0.09
SMC4-209ENST00000468653 GLMPQ8WWB7 406 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 SGK494Q96LW2 274 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 C16orf95Q9H693 158 aa14.5□□□□□ -0.09
SMC4-209ENST00000468653 IGHV4OR15-8A0A075B7B6 117 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 A0A087WW49 117 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 IGHV7-4-1A0A0J9YVY3 117 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 K7EQM0 130 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 M0R3E3 92 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 MGST1P10620 155 aaKnown RBP14.49□□□□□ -0.09
SMC4-209ENST00000468653 MEOX2P50222 304 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 TCTEX1D4Q5JR98 221 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 SFRP2Q96HF1 295 aa14.49□□□□□ -0.09
SMC4-209ENST00000468653 ZNF331Q9NQX6 463 aaPredicted RBP14.49□□□□□ -0.09
SMC4-209ENST00000468653 PPP1R2P9O14990 202 aa14.48□□□□□ -0.09
SMC4-209ENST00000468653 FAM24BQ8N5W8 94 aa14.48□□□□□ -0.09
SMC4-209ENST00000468653 SLC50A1Q9BRV3 221 aa14.48□□□□□ -0.09
SMC4-209ENST00000468653 RHPN1-AS1Q9BWJ2 59 aa14.48□□□□□ -0.09
SMC4-209ENST00000468653 URGCP-MRPS24S4R325 110 aa14.48□□□□□ -0.09
SMC4-209ENST00000468653 ANK3Q12955 4377 aaKnown RBP14.48□□□□□ -0.09
SMC4-209ENST00000468653 COLCA2A8K830 154 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 OR5I1Q13606 314 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 C18orf65Q6ZTR6 163 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 NHLRC2Q8NBF2 726 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 C4orf3Q8WVX3 66 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 FLNBO75369 2602 aaKnown RBP14.47□□□□□ -0.09
SMC4-209ENST00000468653 DIRC3C9JPN6 131 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 IGLV2-8P01709 118 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 IGFL4Q6B9Z1 124 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 OR10G8Q8NGN5 311 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 LINC01006Q8NI28 216 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 SMPXQ9UHP9 88 aa14.47□□□□□ -0.09
SMC4-209ENST00000468653 GCGP01275 180 aa14.46□□□□□ -0.09
SMC4-209ENST00000468653 HOXD3P31249 432 aaPredicted RBP14.46□□□□□ -0.09
SMC4-209ENST00000468653 TRAV8-1A0A0A6YYK1 113 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 CHEK1O14757 476 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 BMI1P35226 326 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 SYNJ2BPP57105 145 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 ERVFC1-1P60608 527 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 C8orf86Q6ZUL3 223 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 REC114Q7Z4M0 266 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 ARL6IP6Q8N6S5 226 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 TMEM75Q8N9X5 138 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 WIPF2Q8TF74 440 aaPredicted RBP14.45□□□□□ -0.1
SMC4-209ENST00000468653 SERTM2A0A1B0GWG4 89 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 LGALS9O00182 355 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 PRB4P10163 310 aaPredicted RBP14.45□□□□□ -0.1
SMC4-209ENST00000468653 HLA-DMBP28068 263 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 RPL11P62913 178 aaKnown RBP14.45□□□□□ -0.1
SMC4-209ENST00000468653 ELOBQ15370 118 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 DEFB136Q30KP8 78 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 PRNTQ86SH4 94 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 KLHL30-AS1Q8NEE0 82 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 DPF1Q92782 380 aa14.45□□□□□ -0.1
SMC4-209ENST00000468653 SMIM12Q96EX1 92 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms