RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 LYPD1Q8N2G4 141 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 RNF141Q8WVD5 230 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 C16orf92Q96LL3 132 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 PRR25Q96S07 402 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 ZNF331Q9NQX6 463 aaPredicted RBP12.18□□□□□ -0.46
HLA-C-205ENST00000466892 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
HLA-C-205ENST00000466892 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
HLA-C-205ENST00000466892 NBEAL1Q6ZS30 2694 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 H3BQ15 152 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 CD7P09564 240 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 NBEAP1P0C6P0 100 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 SULT1A2P50226 295 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 UBE2L3P68036 154 aaKnown RBP12.17□□□□□ -0.46
HLA-C-205ENST00000466892 PSG9Q00887 426 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 WFDC3Q8IUB2 231 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 LRRC20Q8TCA0 184 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
HLA-C-205ENST00000466892 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
HLA-C-205ENST00000466892 PYYP10082 97 aa12.16□□□□□ -0.46
HLA-C-205ENST00000466892 SUN5Q8TC36 379 aa12.16□□□□□ -0.46
HLA-C-205ENST00000466892 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
HLA-C-205ENST00000466892 ZNF586Q9NXT0 402 aa12.16□□□□□ -0.46
HLA-C-205ENST00000466892 ZNF688P0C7X2 276 aa12.15□□□□□ -0.46
HLA-C-205ENST00000466892 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.46
HLA-C-205ENST00000466892 ZNF726P1Q15940 193 aa12.15□□□□□ -0.46
HLA-C-205ENST00000466892 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
HLA-C-205ENST00000466892 MRPL53Q96EL3 112 aaKnown RBP12.15□□□□□ -0.46
HLA-C-205ENST00000466892 PRELID1Q9Y255 219 aa12.15□□□□□ -0.46
HLA-C-205ENST00000466892 MAP1LC3B2A6NCE7 125 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 TEX46H3BTG2 121 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 OR10J4P0C629 311 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 GCHFRP30047 84 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 DEFB131AP59861 70 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 PSMG4Q5JS54 123 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 FAM24BQ8N5W8 94 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 FAM213BQ8TBF2 198 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 MAP1LC3BQ9GZQ8 125 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 AAMDCQ9H7C9 122 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 PLA2G2EQ9NZK7 142 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
HLA-C-205ENST00000466892 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 TRAV1-1A0A0B4J248 108 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 NDUFB4O95168 129 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 FOXI2Q6ZQN5 318 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 ARL6IP6Q8N6S5 226 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 ARL2-SNX15V9GYD0 113 aa12.13□□□□□ -0.47
HLA-C-205ENST00000466892 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 K7EIL1 84 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 SLC17A3O00476 420 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 FHITP49789 147 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 PSG3Q16557 428 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
HLA-C-205ENST00000466892 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
HLA-C-205ENST00000466892 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
HLA-C-205ENST00000466892 HBE1P02100 147 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 PPT1P50897 306 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 DEFB125Q8N687 156 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 SFT2D1Q8WV19 159 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
HLA-C-205ENST00000466892 A0A1W2PRE2 83 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 DEFA6Q01524 100 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 TEX261Q6UWH6 196 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 SAV1Q9H4B6 383 aaPredicted RBP12.1□□□□□ -0.47
HLA-C-205ENST00000466892 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
HLA-C-205ENST00000466892 H3BTX0 84 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
HLA-C-205ENST00000466892 IFNA7P01567 189 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 RANP62826 216 aaKnown RBP12.09□□□□□ -0.47
HLA-C-205ENST00000466892 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 RNF182Q8N6D2 247 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 RPUSD4Q96CM3 377 aaKnown RBP12.09□□□□□ -0.47
HLA-C-205ENST00000466892 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 Q9H3A6 140 aa12.09□□□□□ -0.47
HLA-C-205ENST00000466892 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
HLA-C-205ENST00000466892 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
HLA-C-205ENST00000466892 A0A0J9YX75 114 aa12.08□□□□□ -0.48
HLA-C-205ENST00000466892 ZNF705EA8MWA4 302 aaPredicted RBP12.08□□□□□ -0.48
HLA-C-205ENST00000466892 PRB2P02812 416 aaPredicted RBP12.08□□□□□ -0.48
HLA-C-205ENST00000466892 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.48
HLA-C-205ENST00000466892 CSN1S1P47710 185 aa12.08□□□□□ -0.48
HLA-C-205ENST00000466892 PMS2P11Q13670 270 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms